Package: pbbam / 0.7.4+ds-1
Metadata
Package | Version | Patches format |
---|---|---|
pbbam | 0.7.4+ds-1 | 3.0 (quilt) |
Patch series
view the series filePatch | File delta | Description |
---|---|---|
ssl md5.patch | (download) |
src/MD5.cpp |
2 1 + 1 - 0 ! |
use libssl for md5.h rather than cram cram/md5.h was part of HTSlib [1] (seems to have been removed in the current development tree), but those headers are not installed by that package's build system. md5.h in particular has a very generic function, served apparently by libssl. Furthermore, the cram/* headers are not intended to be used directly [2]. This patch uses libssl to provide md5.h for this package. . 1. https://anonscm.debian.org/cgit/debian-med/htslib.git/tree/cram/md5.h?id=12251926b9d0265738d701bb0add6fe9d070ccb3 2. http://sourceforge.net/p/samtools/mailman/message/33488076/ |
remove bam2sam.patch | (download) |
tools/CMakeLists.txt |
1 0 + 1 - 0 ! |
exclude the bam2sam utility It is a convenience tool provided by upstream to avoid depending on samtools. We actually have trouble building it in Debian and have easy access to samtools. |
1