Package: pymol / 2.4.0+dfsg-2
Metadata
Package | Version | Patches format |
---|---|---|
pymol | 2.4.0+dfsg-2 | 3.0 (quilt) |
Patch series
view the series filePatch | File delta | Description |
---|---|---|
02_test suite.patch | (download) |
test/pymol-test |
43 43 + 0 - 0 ! |
patch to make the test-suite work during debian build-time. |
03_povray.patch | (download) |
modules/pymol/povray.py |
2 1 + 1 - 0 ! |
adjust povray options |
22_fix_pymol_import.patch | (download) |
modules/pymol/__init__.py |
3 3 + 0 - 0 ! |
fix importing of pymol by setting pymol_path explicitly Bug-Debian: http://bugs.debian.org/556878 |
27_fix_pymol_path_in_setup.patch | (download) |
setup.py |
2 1 + 1 - 0 ! |
--- |
28_no_data_install_in_python_path.patch | (download) |
setup.py |
2 0 + 2 - 0 ! |
--- |
31_fix_format security.patch | (download) |
contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp |
2 1 + 1 - 0 ! |
fix "error: format not a string literal and no format arguments [-werror=format-security]" (#759860) |
32_fix_spelling_lintian_warnings.patch | (download) |
layer1/Setting.cpp |
2 1 + 1 - 0 ! |
fix spelling lintian warnings |
33_fix_relative_paths_in_example_scripts.patch | (download) |
examples/chempy/generate_amber.py |
7 4 + 3 - 0 ! |
fix relative paths in example scripts Some example scripts are intended to be used from directory they are located |
34_fix_examples_add_fetch_instead_of_load.patch | (download) |
examples/cookbook/contact.pml |
3 2 + 1 - 0 ! |
use fetch instead of load in pymol scripts when necessary In example scripts, which require .pdb files not shipped with upstream source, use fetch instead of load, to download required Protein Data Bank structures. . See more on pymol's `fetch` command here: http://www.pymolwiki.org/index.php/Fetch |
40_mstop_movies.patch | (download) |
data/demo/cgo03.py |
5 4 + 1 - 0 ! |
modify examples so that they do not run forever When invoked in script mode (-c) pymol up until v2 used to exit; newer versions will loop the aninamtion forever. This patch puts an explicit stop at the end of each script where there is an animation being generated to make it stop playing. . While this potentially makes the examples less useful to run from the command line themselves without editing, it at least fixes the tests. Bug: #897191 |