| random access file.patch | (download) |
src/edu/msu/cme/rdp/readseq/readers/core/EMBLCore.java |
6 4 + 2 - 0 !
src/edu/msu/cme/rdp/readseq/readers/core/FastaCore.java |
5 3 + 2 - 0 !
src/edu/msu/cme/rdp/readseq/readers/core/FastqCore.java |
11 6 + 5 - 0 !
src/edu/msu/cme/rdp/readseq/readers/core/GenbankCore.java |
5 3 + 2 - 0 !
src/edu/msu/cme/rdp/readseq/readers/core/SFFCore.java |
9 5 + 4 - 0 !
src/edu/msu/cme/rdp/readseq/readers/core/STKCore.java |
10 6 + 4 - 0 !
src/edu/msu/cme/rdp/readseq/readers/core/SeqReaderCore.java |
6 3 + 3 - 0 !
src/edu/msu/cme/rdp/readseq/utils/BufferedRandomAccessFile.java |
294 178 + 116 - 0 !
8 files changed, 208 insertions(+), 138 deletions(-) |
reimplement bufferedrandomaccessfile
Original implementation partially overriden RandomAccessFile methods.
This patch provides a replacement implementation that aggregates
RandomAccessFile and uses the same serialization logic.
This resolves the dependency on RandomAccessFile implementation
details.
The write methods and logic were removed as they are not used in the
main code.
|
