SeqPrep.c | 7 4 + 3 - 0 !
stdaln.c | 6 2 + 4 - 0 !
2 files changed, 6 insertions(+), 7 deletions(-)

 default debian compiler options throw errors for
 unused variables.  This patch is removing those variables.

Makefile | 4 2 + 2 - 0 !
1 file changed, 2 insertions(+), 2 deletions(-)

---

SeqPrep.c | 18 9 + 9 - 0 !
1 file changed, 9 insertions(+), 9 deletions(-)

 replace all instances of the 'float' datatype in seqprep.c with 'double'

Test/RUNTEST.sh | 10 5 + 5 - 0 !
Test/SimTest/RUNTEST.sh | 8 4 + 4 - 0 !
Test/SimTest/sens_vs_spec.py | 6 3 + 3 - 0 !
Test/SimTest/simseq_trimmed_error_check.py | 18 9 + 9 - 0 !
Test/seqlens.py | 6 3 + 3 - 0 !
5 files changed, 24 insertions(+), 24 deletions(-)

 use 2to3 to port from python2 to python3
Bug-Debian: https://bugs.debian.org/938467

SeqPrep.c | 1 1 + 0 - 0 !
1 file changed, 1 insertion(+)

 add missing feature test macro for getopt.