Package: seqsero / 1.0.1+dfsg-4

Metadata

Package Version Patches format
seqsero 1.0.1+dfsg-4 3.0 (quilt)

Patch series

view the series file
Patch File delta Description
fix_perl_interpreter.patch | (download)

libs/split_interleaved_fastq.pl | 4 2 + 2 - 0 !
1 file changed, 2 insertions(+), 2 deletions(-)

 fix shebang line


fix_usage.patch | (download)

SeqSero.py | 2 1 + 1 - 0 !
1 file changed, 1 insertion(+), 1 deletion(-)

 in debian you do not call the python script but
 rather a renamed wrapper.  Also fix spelling issue


2to3.patch | (download)

SeqSero.py | 22 11 + 11 - 0 !
libs/BWA_analysis_H_update_new_family_dependent.py | 100 50 + 50 - 0 !
libs/BWA_analysis_O_new_dependent.py | 48 24 + 24 - 0 !
libs/H_combination_output_analysis.py | 88 44 + 44 - 0 !
libs/Initial_Conditions.py | 10 5 + 5 - 0 !
libs/Initial_functions.py | 2 1 + 1 - 0 !
libs/Otype_determine_analysis.py | 144 72 + 72 - 0 !
libs/compare_and_change_two_fastq_id.py | 12 6 + 6 - 0 !
libs/deletion_compare.py | 12 6 + 6 - 0 !
libs/run_auto_All_for_assemblies.py | 12 6 + 6 - 0 !
libs/run_auto_All_for_web_multi_revise.py | 22 11 + 11 - 0 !
libs/special_gene_test_assemblies.py | 10 5 + 5 - 0 !
12 files changed, 241 insertions(+), 241 deletions(-)

 use 2to3 to port from python2 to python3
Bug-Debian: https://bugs.debian.org/938468
Bug-Upstream: https://github.com/denglab/SeqSero/issues/12