Package: sra-sdk / 2.10.9+dfsg-2

absolute_vschema_path_in_test.patch Patch series | download
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Author: Andreas Tille <tille@debian.org>
Last-Update: Mon, 06 Jun 2016 11:24:46 +0200
Description: We need to set absolute paths also in the test
 (test fails anyway for different reasons and is excluded later)

--- a/test/vcf-loader/test-vcf-loader.cpp
+++ b/test/vcf-loader/test-vcf-loader.cpp
@@ -669,7 +669,7 @@ protected:
 const char VcfDatabaseFixture::schema_text[] =
 "version 1; "
 
-"include 'align/align.vschema';"
+"include '/usr/lib/ncbi-vdb/align/align.vschema';"
 
 " table variant #1 { "
 "     extern    column U32 ref_id = .ref_id;"