1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
|
Author: Andreas Tille <tille@debian.org>
Last-Update: Mon, 06 Jun 2016 11:24:46 +0200
Description: Debian has several flavours of hdf5 - use serial here
--- a/setup/konfigure.perl
+++ b/setup/konfigure.perl
@@ -1651,7 +1651,7 @@ sub check_compiler {
$log = ' int main() { }\n'
} elsif ($n eq 'hdf5') {
$library = '-lhdf5_serial -Wl,-Bdynamic -ldl -lm -lz';
- $log = '#include <hdf5.h> \n int main() { H5close (); }\n'
+ $log = '#include <hdf5/serial/hdf5.h> \n int main() { H5close (); }\n'
} elsif ($n eq 'fuse') {
$flags = '-D_FILE_OFFSET_BITS=64';
$library = '-lfuse';
--- a/tools/pacbio-load/Makefile
+++ b/tools/pacbio-load/Makefile
@@ -105,7 +105,7 @@ PACBIO_LOAD_LIB = \
-stk-version \
-skdf5 \
-sload \
- -shdf5 \
+ -shdf5_serial \
-sncbi-wvdb \
-sm \
|
