Package: ugene / 34.0+dfsg-2

Metadata

Package Version Patches format
ugene 34.0+dfsg-2 3.0 (quilt)

Patch series

view the series file
Patch File delta Description
hardening.patch | (download)

src/ugene_globals.pri | 9 9 + 0 - 0 !
1 file changed, 9 insertions(+)

 add qmake flags to add hardening
 Also remove parameters for win32 and macx because they seem to 
 irritate the build system.  Merged into this patch, because they 
 overlap. 
Last-Updated: 2015-12-10
add_missing_header.patch | (download)

src/plugins/external_tool_support/src/trimmomatic/steps/SlidingWindowStep.cpp | 1 1 + 0 - 0 !
1 file changed, 1 insertion(+)

 fix build issue by adding missing headers

do_not_build_phylip.patch | (download)

ugene.pro | 1 0 + 1 - 0 !
1 file changed, 1 deletion(-)

 do not build phylip plugin which is removed since
 the code copy of the old version has no free license


fix_desktop_file.patch | (download)

installer/_common_data/ugene.desktop | 2 1 + 1 - 0 !
1 file changed, 1 insertion(+), 1 deletion(-)

 add exec code for mime in desktop file


use_debian_sqlite.patch | (download)

src/corelibs/U2Core/src/dbi/U2SQLiteTripleStore.cpp | 2 1 + 1 - 0 !
src/corelibs/U2Core/src/dbi/U2SqlHelpers.cpp | 2 1 + 1 - 0 !
src/corelibs/U2Formats/src/sqlite_dbi/SQLiteBlobInputStream.cpp | 2 1 + 1 - 0 !
src/corelibs/U2Formats/src/sqlite_dbi/SQLiteBlobOutputStream.cpp | 2 1 + 1 - 0 !
src/corelibs/U2Formats/src/sqlite_dbi/SQLiteDbi.cpp | 2 1 + 1 - 0 !
src/plugins/dbi_bam/src/Dbi.cpp | 2 1 + 1 - 0 !
src/ugene_globals.pri | 4 2 + 2 - 0 !
7 files changed, 8 insertions(+), 8 deletions(-)

 tried to use debian packages sqlite3
 but failed because package does not build that way
ftbfs_with_qt_515.patch | (download)

src/corelibs/U2Designer/src/WorkflowGUIUtils.cpp | 1 1 + 0 - 0 !
src/corelibs/U2Gui/src/util/GUIUtils.cpp | 1 1 + 0 - 0 !
src/corelibs/U2View/src/ov_sequence/Overview.cpp | 1 1 + 0 - 0 !
src/corelibs/U2View/src/ov_sequence/view_rendering/SequenceViewAnnotatedRenderer.h | 1 1 + 0 - 0 !
4 files changed, 4 insertions(+)

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