1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
|
TODO List - worlds simplest bugtracking system
--Packaging--
--Main app--
To Implement:
== Next version ==
* Fix animation under windows, seems to crash
* External program could have a no-reload input mode
* range-> ion mapping changes in rangefile filter do not persist across save/load cycle
* Ensure volume rendering working on all platforms
* Selection of objects under windows not reliable.
- A possible fix is in (9d9ab + 1), but not tested
* Possible bugs with randomisation.
-In some cases,strong randomisation may return
same result each time for ion shuffle?
== Eventually ==
* Update drawing code to opengl2.0
* Filters: Spatial Analysis: Local chemistry based filtering to handle unranged ions (possibly change Local
Chemistry's behaviour too)
* XML file loading is a bit iffy if paths are moved
around. A nice convenience feature would be to have an
option to scan for the files in a relative manner if
they are not found using the absolute path
* There is no way to get a mass spectrum from clusters with background.
- Import clustering w background from posgen?
* Voxelisation filter should not show ions disabled in upstream range
* Improve voxel data export UI
* Mesh generation/operation?
- This is tricky. I don't have a good mesh library
* Proxigram?
* Update to qhull 2015's qhull_r (reentrant qhull).
- This requires some refactoring of the doHull wrapper for convex hull computation
* OPS and other 3DAP formats reader?
* Polynomial error estimator in graph
* Ion exchange/explode filter
* DTD (Document type descriptor) for state files, to
specify a consistent statefile structure
- How to ensure version compatibility in future
state files?
* Voxelisation filter needs progress
* Better progress during cluster ranging
* Billboard text
* Camera animation control (slerp?)
* Range file drag/drop ignores drop coordinates; this could be useful
in trying to interpret where the user wants to drop the object
* Plots cannot currently be updated on name change. Need to add "needUpdate" to setUserString
* Isotope overlay in normal spectra
- Include full atomic species eg 57^Fe18^O in label, and charge state
* Poisson error estimation
Outstanding bugs:
== Next release==
* Under windows there is a problem with parsing the rss feed. This results in a user-visible error
== Eventually==
* Cluster filter wont save state correctly if parent
rangefile has disabled ions. It will output incorrect
number of enabled ions, and get wiped during next ::initFilter
- Spatial analysis is a bit more sane - it records the name of the
ions in use
* Spatial analysis filter uses a subset of ions from the parent rangefile
- It might be better to use a full set of ions,
as this would eliminate the logic required to sync
the two. The properties could be masked as needed
* Lighting calculations on isosurfaces can be problematic. See example package
* Select an X-Y crop, camera coords, on a dataset,
then view target (-9.14237,-0.995174,83.2904) origin
(188.23,-0.995174,83.2904). Now press ctrl+space. Note
dataset disappears until mouse motion. This is due to
camera up vector not being updated, I suspect.
* 3D Text bounding boxes are wrong.
OSX:
* drag drop not working?
== Needs reproducing ==
Auditing:
== Next release ==
Performance:
* Scene is sometimes continuously refreshed during post effects, causing CPU usage
to max out.
- This doesn't happen on all systems.
* Clipping sphere/cylinder does BB test? (only useful if we have bb cache)
* Pos limit loader could alter its behaviour when
sampling rates some percentage to be determined (load
file, skip buffer).
* Clustering can now be paralellised.
* Examine performance characteristics of HULL_GRAB in ioninfo
* Conversion of double axis-angle rotations to single axis angle rotations - any value here?
- Use TRIAD/ Wahba's problem to solve. Should be a lot faster?
Misc:
-- Refactor/cleanup --
* read/write xml could have default reader/writer routines
Variables could be registered, then an order independant parser
could be used to "vacuum" most of the data. Bounds/corretness
checking could be used thereafter, and fallback to traditional
xml tree traversal could be done after that
* Plotting code is a nightmare. Data model for plot.h is not
very well thought out, leading to large duplication, and elaborate special-case-ing
- Plots need log/non-log axes
- Plots need to be connected/disconnected
- Plots need to be able to specify bounding boxes separate from their data
- This would aid things like bar plots, pie charts
- Plots need to be able to set strings/legends
- There is little diference between plot1D and plot2D, really.
- Error bar handling is a bit of a hack. Error generation should be moved to filters
* work out which inline FIXMEs and TODOs are still valid, and need attention
* K3DTree currently requires public access to members of boundcube
* Enums should be, where possible, moved into their relevant class' namespace
* Better error code behaviour for filters. There is a lot of needless duplication
* There is a confusion of responsibility between filter.{cpp,h} and filterCommon.{cpp,h}
- what is the division here? this is unclear
* Experiment with "-gc-sections" flag on gcc to shrink compiled libraries
-- Deprecate --
* On Minor version change:
- DataLoadFilter::readState(...) -> doSample test for statefiles without doSample.
- 3Depict versions prior to 1207:2a01b7e83d75
- VoxeliseFilter::readState(...) -> axial slice read will be silently skipped if it is missing
- 3Depict versions <= 1628:ffa0b851e966 don't know about this element
- Annotation XML element "sphereanglesize" name doesn't match its purpose, and needs to be renamed "spheremarkersize"
|
