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bin_PROGRAMS = MergePaths MergeContigs PathConsensus
MergePaths_CPPFLAGS = -I$(top_srcdir) \
-I$(top_srcdir)/Common \
-I$(top_srcdir)/DataLayer
MergePaths_CXXFLAGS = $(AM_CXXFLAGS) $(OPENMP_CXXFLAGS)
MergePaths_LDADD = \
$(top_builddir)/DataBase/libdb.a \
$(SQLITE_LIBS) \
$(top_builddir)/DataLayer/libdatalayer.a \
$(top_builddir)/Common/libcommon.a
MergePaths_SOURCES = \
MergePaths.cpp
MergeContigs_CPPFLAGS = -I$(top_srcdir) \
-I$(top_srcdir)/Align \
-I$(top_srcdir)/Common \
-I$(top_srcdir)/DataLayer
MergeContigs_LDADD = \
$(top_builddir)/DataBase/libdb.a \
$(SQLITE_LIBS) \
$(top_builddir)/DataLayer/libdatalayer.a \
$(top_builddir)/Align/libalign.a \
$(top_builddir)/Common/libcommon.a
MergeContigs_SOURCES = MergeContigs.cpp
PathConsensus_CPPFLAGS = -I$(top_srcdir) \
-I$(top_srcdir)/Align \
-I$(top_srcdir)/Common \
-I$(top_srcdir)/DataLayer \
-I$(top_srcdir)/SimpleGraph
PathConsensus_LDADD = \
$(top_builddir)/DataBase/libdb.a \
$(SQLITE_LIBS) \
$(top_builddir)/DataLayer/libdatalayer.a \
$(top_builddir)/Align/libalign.a \
$(top_builddir)/Common/libcommon.a \
$(top_builddir)/dialign/libdialign.a
PathConsensus_SOURCES = \
PathConsensus.cpp
CXXFLAGS += -Wno-deprecated-declarations
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