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bin_PROGRAMS = ABYSS-P
if PAIRED_DBG
bin_PROGRAMS += abyss-paired-dbg-mpi
endif
libdb = $(top_builddir)/DataBase/libdb.a $(SQLITE_LIBS)
ABYSS_P_CPPFLAGS = -I$(top_srcdir)
ABYSS_P_LDADD = \
$(top_builddir)/Assembly/libassembly.a \
$(top_builddir)/Common/libcommon.a \
$(top_builddir)/DataLayer/libdatalayer.a \
$(libdb) \
$(MPI_LIBS)
ABYSS_P_SOURCES = \
parallelAbyss.cpp \
CommLayer.cpp CommLayer.h \
NetworkSequenceCollection.cpp NetworkSequenceCollection.h \
SequenceCollection.h \
MessageBuffer.cpp MessageBuffer.h \
Messages.cpp Messages.h
abyss_paired_dbg_mpi_CPPFLAGS = $(ABYSS_P_CPPFLAGS) -DPAIRED_DBG
abyss_paired_dbg_mpi_LDADD = $(ABYSS_P_LDADD)
abyss_paired_dbg_mpi_SOURCES = $(ABYSS_P_SOURCES)
CXXFLAGS += -Wno-deprecated-declarations
|
