1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
|
bin_PROGRAMS = abyss-rresolver-short
AM_CXXFLAGS += $(PTHREAD_CFLAGS) -Wno-deprecated-declarations
abyss_rresolver_short_CXXFLAGS = \
$(AM_CXXFLAGS) $(OPENMP_CXXFLAGS) \
-I$(top_srcdir) -I$(top_srcdir)/Common -I$(top_srcdir)/DataLayer -I$(top_srcdir)/RResolver/btllib/include
abyss_rresolver_short_SOURCES = \
RResolverShort.cpp \
Contigs.cpp Contigs.h
LDFLAGS += -pthread
abyss_rresolver_short_LDADD = \
$(top_builddir)/DataLayer/libdatalayer.a \
$(top_builddir)/Common/libcommon.a \
libralgorithmsshort.a \
-lbtllib
noinst_LIBRARIES = libralgorithmsshort.a
libralgorithmsshort_a_CXXFLAGS = \
$(AM_CXXFLAGS) $(OPENMP_CXXFLAGS) \
-I$(top_srcdir) -I$(top_srcdir)/Common -I$(top_srcdir)/DataLayer -I$(top_srcdir)/RResolver/btllib/include
libralgorithmsshort_a_SOURCES = \
RAlgorithmsShort.cpp RAlgorithmsShort.h \
BloomFilters.cpp BloomFilters.h \
Contigs.cpp Contigs.h \
SequenceTree.cpp SequenceTree.h \
RUtils.cpp RUtils.h
libralgorithmsshort_a_LIBADD = \
$(wildcard $(top_builddir)/DataLayer/*.o) \
$(wildcard $(top_builddir)/Common/*.o)
|
