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abyss 2.3.10-1
  • links: PTS, VCS
  • area: main
  • in suites: forky, sid, trixie
  • size: 8,284 kB
  • sloc: cpp: 78,182; ansic: 6,512; makefile: 2,252; perl: 672; sh: 509; haskell: 412; python: 4
file content (42 lines) | stat: -rw-r--r-- 1,327 bytes parent folder | download | duplicates (3)
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Bug-Database: https://github.com/bcgsc/abyss/issues
Bug-Submit: https://github.com/bcgsc/abyss/issues/new
Reference:
- Author: >
    Shaun D. Jackman and Benjamin P. Vandervalk and Hamid Mohamadi
    and Justin Chu and Sarah Yeo and S. Austin Hammond and Golnaz Jahesh
    and Hamza Khan and Lauren Coombe and Rene L. Warren and İnanç Birol
  Title: >
    "ABySS 2.0: resource-efficient assembly of large genomes using a Bloom
    filter"
  Journal: Genome Research
  Year: 2017
  Volume: 27
  Number: 5
  Pages: 768-777
  PMID: 28232478
  DOI: 10.1101/gr.214346.116
  eprint: https://genome.cshlp.org/content/27/5/768.full.pdf
- Author: >
    Jared T. Simpson and Kim Wong and Shaun D. Jackman and Jacqueline E. Schein
    and Steven J.M. Jones and İnanç Birol
  Title: "ABySS: A parallel assembler for short read sequence data"
  Journal: Genome Research
  Year: 2009
  Volume: 19
  Number: 6
  Pages: 1117-23
  PMID: 19251739
  DOI: 10.1101/gr.089532.108
  URL: http://genome.cshlp.org/content/19/6/1117
  eprint: http://genome.cshlp.org/content/19/6/1117.full.pdf
Registry:
- Name: bio.tools
  Entry: ABySS
- Name: OMICtools
  Entry: OMICS_00006
- Name: SciCrunch
  Entry: SCR_010709
- Name: conda:bioconda
  Entry: abyss
Repository: https://github.com/bcgsc/abyss.git
Repository-Browse: https://github.com/bcgsc/abyss