1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
|
/*************************************************************************\
* AdapterRemoval - cleaning next-generation sequencing reads *
* *
* Copyright (C) 2011 by Stinus Lindgreen - stinus@binf.ku.dk *
* Copyright (C) 2014 by Mikkel Schubert - mikkelsch@gmail.com *
* *
* If you use the program, please cite the paper: *
* S. Lindgreen (2012): AdapterRemoval: Easy Cleaning of Next Generation *
* Sequencing Reads, BMC Research Notes, 5:337 *
* http://www.biomedcentral.com/1756-0500/5/337/ *
* *
* This program is free software: you can redistribute it and/or modify *
* it under the terms of the GNU General Public License as published by *
* the Free Software Foundation, either version 3 of the License, or *
* (at your option) any later version. *
* *
* This program is distributed in the hope that it will be useful, *
* but WITHOUT ANY WARRANTY; without even the implied warranty of *
* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the *
* GNU General Public License for more details. *
* *
* You should have received a copy of the GNU General Public License *
* along with this program. If not, see <http://www.gnu.org/licenses/>. *
\*************************************************************************/
#include "testing.hpp"
#include "fastq.hpp"
namespace ar
{
///////////////////////////////////////////////////////////////////////////////
// Names (default objects)
TEST_CASE("Global encodings have expected names", "[fastq_encoding]")
{
REQUIRE(FASTQ_ENCODING_33.name() == std::string("Phred+33"));
REQUIRE(FASTQ_ENCODING_64.name() == std::string("Phred+64"));
REQUIRE(FASTQ_ENCODING_SAM.name() == std::string("Phred+33"));
REQUIRE(FASTQ_ENCODING_SOLEXA.name() == std::string("Solexa"));
}
}
|
