File: param.in

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aevol 9.3.0-1
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###################################
#         AEVOL PARAMATERS        #
###################################

########## Size of the initial random chromosome to generate ##########
CHROMOSOME_INITIAL_LENGTH   5000

########## Random generator setup (for reproducibility) ##########
SEED    7250909

########## Population Structure ##########
GRID_SIZE   32 32

########## Selection ##########
SELECTION_SCHEME    fitness_proportionate   1000

########## Mutation rates ##########
POINT_MUTATION_RATE     1e-6
SMALL_INSERTION_RATE    1e-6
SMALL_DELETION_RATE     1e-6
MAX_INDEL_SIZE          6

########## Rearrangement rates ##########
DUPLICATION_RATE        1e-6
DELETION_RATE           1e-6
TRANSLOCATION_RATE      1e-6
INVERSION_RATE          1e-6

########## Target function ##########
ENV_SAMPLING      300
ENV_ADD_GAUSSIAN  1.2   0.52  0.12
ENV_ADD_GAUSSIAN -1.4   0.5   0.07
ENV_ADD_GAUSSIAN  0.3   0.8   0.03
MAX_TRIANGLE_WIDTH      0.033333333

########## Recording ##########
CHECKPOINT_STEP 1000
RECORD_TREE     ON 1000
STATS_BEST      ON 100
STATS_POP       ON 100