File: control

package info (click to toggle)
anfo 0.98-7
  • links: PTS, VCS
  • area: main
  • in suites: bullseye, buster, sid
  • size: 2,256 kB
  • sloc: sh: 10,041; cpp: 8,548; ansic: 530; lisp: 337; makefile: 64
file content (67 lines) | stat: -rw-r--r-- 2,751 bytes parent folder | download
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
Source: anfo
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders: Tim Booth <tbooth@ceh.ac.uk>,
           Andreas Tille <tille@debian.org>
Section: science
Priority: optional
Build-Depends: debhelper (>= 11~),
               libpopt-dev,
               libprotobuf-dev,
               libelk0-dev,
               libelk0,
               zlib1g-dev,
               libbz2-dev,
               pkg-config,
               protobuf-compiler,
               d-shlibs (>= 0.77)
Standards-Version: 4.2.1
Vcs-Browser: https://salsa.debian.org/med-team/anfo
Vcs-Git: https://salsa.debian.org/med-team/anfo.git
Homepage: http://bioinf.eva.mpg.de/anfo/

Package: anfo
Architecture: any
Depends: ${shlibs:Depends},
         ${misc:Depends},
         libanfo0
Description: Short Read Aligner/Mapper from MPG
 Anfo is a mapper in the spirit of Soap/Maq/Bowtie, but its implementation takes
 more after BLAST/BLAT. It's most useful for the alignment of sequencing reads
 where the DNA sequence is somehow modified (think ancient DNA or bisulphite
 treatment) and/or there is more divergence between sample and reference than
 what fast mappers will handle gracefully (say the reference genome is missing
 and a related species is used instead).

Package: libanfo0
Architecture: any
Section: libs
Depends: ${shlibs:Depends},
         ${misc:Depends}
Description: Library for Short Read Aligner/Mapper from MPG
 Anfo is a mapper in the spirit of Soap/Maq/Bowtie, but its implementation takes
 more after BLAST/BLAT. It's most useful for the alignment of sequencing reads
 where the DNA sequence is somehow modified (think ancient DNA or bisulphite
 treatment) and/or there is more divergence between sample and reference than
 what fast mappers will handle gracefully (say the reference genome is missing
 and a related species is used instead).
 .
 This package contains the dynamic library for the anfo binaries.

Package: libanfo0-dev
Architecture: any
Section: libdevel
Depends: libanfo0 (= ${binary:Version}),
         ${devlibs:Depends},
         ${misc:Depends}
Conflicts: libanfo-dev
Provides: libanfo-dev
Description: Development files for Short Read Aligner/Mapper from MPG
 Anfo is a mapper in the spirit of Soap/Maq/Bowtie, but its implementation takes
 more after BLAST/BLAT. It's most useful for the alignment of sequencing reads
 where the DNA sequence is somehow modified (think ancient DNA or bisulphite
 treatment) and/or there is more divergence between sample and reference than
 what fast mappers will handle gracefully (say the reference genome is missing
 and a related species is used instead).
 .
 This package contains the development files that might be used in connection
 with the anfo binaries.