File: itkAverageAffineTransformFunction.h

package info (click to toggle)
ants 2.1.0-5
  • links: PTS, VCS
  • area: main
  • in suites: stretch
  • size: 10,656 kB
  • sloc: cpp: 84,137; sh: 11,419; perl: 694; xml: 115; makefile: 74; python: 48
file content (204 lines) | stat: -rw-r--r-- 7,609 bytes parent folder | download | duplicates (2)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
/*=========================================================================

 Program:   Advanced Normalization Tools
 Module:    $RCSfile: itkWarpImageMultiTransformFilter.h,v $
 Language:  C++
 Date:      $Date: 2009/01/08 21:36:48 $
 Version:   $Revision: 1.18 $

 Copyright (c) ConsortiumOfANTS. All rights reserved.
 See accompanying COPYING.txt or
 http://sourceforge.net/projects/advants/files/ANTS/ANTSCopyright.txt for details.

 This software is distributed WITHOUT ANY WARRANTY; without even
 the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR
 PURPOSE.  See the above copyright notices for more information.

 =========================================================================*/
#ifndef __itkAverageAffineTransformFunction_h
#define __itkAverageAffineTransformFunction_h

#include "itkMacro.h"
#include "itkConceptChecking.h"

#include "itkANTSCenteredAffine2DTransform.h"
#include "itkANTSAffine3DTransform.h"

#include <list>

namespace itk
{
/*
 */

namespace AverageAffineTransformFunctionHelperNameSpace
{
template <int D>
struct Dispatcher
  {
  };

template <class TAffine>
struct HelperCommonType
  {
  typedef TAffine InternalAffineTransformType;

  typedef typename InternalAffineTransformType::Pointer InternalAffineTransformPointerType;
  typedef struct
    {
    InternalAffineTransformPointerType aff;
    double weight;
    } SingleInternalTransformItemType;

  typedef std::list<SingleInternalTransformItemType>           InternalTransformListType;
  typedef typename InternalAffineTransformType::ParametersType ParametersType;

  static void ComputeAveragePartialParameters(InternalTransformListType & transform_list,
                                              ParametersType & average_parameters, unsigned int iStart,
                                              unsigned int iEnd);
  };

template <class T>
class HelperType;

// {
// // purposely not include any types
// };

// explicit specialization for 2D affine transform
template <>
class HelperType<Dispatcher<2> >
{
public:
  typedef ANTSCenteredAffine2DTransform<double> InternalAffineTransformType;

  typedef HelperCommonType<InternalAffineTransformType>::InternalAffineTransformPointerType
    InternalAffineTransformPointerType;
  typedef HelperCommonType<InternalAffineTransformType>::SingleInternalTransformItemType
    SingleInternalTransformItemType;
  typedef HelperCommonType<InternalAffineTransformType>::InternalTransformListType InternalTransformListType;
  typedef HelperCommonType<InternalAffineTransformType>::ParametersType            ParametersType;

  static void ComputeAverageScaleParameters(InternalTransformListType & transform_list,
                                            ParametersType & average_parameters);

  static void ComputeAverageShearingParameters(InternalTransformListType & transform_list,
                                               ParametersType & average_parameters);

  static void ComputeAverageRotationParameters(InternalTransformListType & transform_list,
                                               ParametersType & average_parameters);

  static void ComputeAverageTranslationParameters(InternalTransformListType & transform_list,
                                                  ParametersType & average_parameters);
};

// explicit specialization for 3D affine transform
template <>
class HelperType<Dispatcher<3> >
{
public:
  typedef ANTSAffine3DTransform<double> InternalAffineTransformType;

  typedef HelperCommonType<InternalAffineTransformType>::InternalAffineTransformPointerType
    InternalAffineTransformPointerType;
  typedef HelperCommonType<InternalAffineTransformType>::SingleInternalTransformItemType
    SingleInternalTransformItemType;
  typedef HelperCommonType<InternalAffineTransformType>::InternalTransformListType InternalTransformListType;
  typedef HelperCommonType<InternalAffineTransformType>::ParametersType            ParametersType;

  static void ComputeAverageScaleParameters(InternalTransformListType & transform_list,
                                            ParametersType & average_parameters);

  static void ComputeAverageShearingParameters(InternalTransformListType & transform_list,
                                               ParametersType & average_parameters);

  static void ComputeAverageRotationParameters(InternalTransformListType & transform_list,
                                               ParametersType & average_parameters);

  static void ComputeAverageTranslationParameters(InternalTransformListType & transform_list,
                                                  ParametersType & average_parameters);
};
}

template <class TTransform>
class AverageAffineTransformFunction
{
public:

  typedef TTransform GenericAffineTransformType;

  itkStaticConstMacro(InputSpaceDimension, unsigned int, GenericAffineTransformType::InputSpaceDimension);
  itkStaticConstMacro(OutputSpaceDimension, unsigned int, GenericAffineTransformType::OutputSpaceDimension);
  itkStaticConstMacro(SpaceDimension, unsigned int, InputSpaceDimension);

  typedef double                                    InternalScalarType;
  typedef Point<InternalScalarType, SpaceDimension> PointType;

  AverageAffineTransformFunction();
  ~AverageAffineTransformFunction()
  {
  }

  ;

  // void PrintSelf(std::ostream& os, Indent indent) const;

  typedef typename GenericAffineTransformType::Pointer GenericAffineTransformPointerType;

  typedef struct
    {
    GenericAffineTransformPointerType aff;
    double weight;
    } SingleTransformItemType;

  typedef std::list<SingleTransformItemType> TransformListType;

  TransformListType & GetTransformList()
  {
    return m_TransformList;
  }

  void PrintTransformList();

  void PushBackAffineTransform(const GenericAffineTransformType* t, double weight);

  void AverageMultipleAffineTransform(const PointType & center_output,
                                      GenericAffineTransformPointerType & affine_output);

#ifdef ITK_USE_CONCEPT_CHECKING
  /** Begin concept checking */
  itkConceptMacro(SameDimensionCheck1,
                  (Concept::SameDimension<InputSpaceDimension, OutputSpaceDimension> ) );
  /** End concept checking */
#endif
protected:
  TransformListType m_TransformList;

// type declaration to include support both 2D and 3D affine transform
protected:

  typedef typename::itk::AverageAffineTransformFunctionHelperNameSpace::HelperType<
      ::itk::AverageAffineTransformFunctionHelperNameSpace::Dispatcher<
        SpaceDimension> > HelperType;

  typedef typename HelperType::InternalAffineTransformType        InternalAffineTransformType;
  typedef typename HelperType::InternalAffineTransformPointerType InternalAffineTransformPointerType;
  typedef typename HelperType::SingleInternalTransformItemType    SingleInternalTransformItemType;
  typedef typename HelperType::InternalTransformListType          InternalTransformListType;

  InternalTransformListType m_InternalTransformList;

  void ConvertGenericAffineToInternalAffineByFixingCenter(GenericAffineTransformPointerType & aff,
                                                          InternalAffineTransformPointerType & iaff,
                                                          const PointType & center);

  void ConvertInternalAffineToGenericAffine(InternalAffineTransformPointerType & iaff,
                                            GenericAffineTransformPointerType & aff);
};
} // end namespace itk

#ifndef ITK_MANUAL_INSTANTIATION
#include "itkAverageAffineTransformFunction.hxx"
#endif

#endif /*__itkAverageAffineTransformFunction_h*/