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#!/bin/bash
set -e
pkg=any2fasta
export LC_ALL=C.UTF-8
if [ "${AUTOPKGTEST_TMP}" = "" ] ; then
AUTOPKGTEST_TMP=$(mktemp -d /tmp/${pkg}-test.XXXXXX)
trap "rm -rf ${AUTOPKGTEST_TMP}" 0 INT QUIT ABRT PIPE TERM
fi
cp -a /usr/share/doc/${pkg}/examples/* "${AUTOPKGTEST_TMP}"
cd "${AUTOPKGTEST_TMP}"
for i in test* ; do
if echo $i | grep -q noseq ; then
# if name contains noseq the script should fail
set +e
${pkg} $i
ret=$?
echo $ret
if [ $ret -ne 0 ]; then
echo "Passed"
fi
set -e
else
${pkg} $i > test.fasta
fi
done
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