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#include "../rfigui/rfiguiwindow.h"
#include "../rfigui/controllers/imagecomparisoncontroller.h"
#include "../rfigui/controllers/rfiguicontroller.h"
#include "../util/logger.h"
#include "../util/progress/stdoutreporter.h"
#include "../imagesets/msimageset.h"
#include "../imagesets/msoptions.h"
#include <version.h>
#include <gtkmm/application.h>
#include <pangomm/init.h>
#include <glibmm/error.h>
#include <glibmm/wrap.h>
#include <string>
#include <vector>
#include <libgen.h>
struct SavedBaseline {
size_t a1Index, a2Index, bandIndex, sequenceIndex;
std::string filename;
bool operator<(const SavedBaseline& rhs) const {
return std::tie(a1Index, a2Index, bandIndex, sequenceIndex, filename) <
std::tie(rhs.a1Index, rhs.a2Index, rhs.bandIndex, rhs.sequenceIndex,
rhs.filename);
}
};
static void run(int argc, char* argv[]) {
int argi = 1;
std::vector<std::string> filenames;
std::set<SavedBaseline> savedBaselines;
bool interactive = true;
std::string dataColumnName = "DATA";
bool plotFlags = true;
std::optional<size_t> intervalStart, intervalEnd;
while (argi < argc) {
if (argv[argi][0] == '-') {
std::string p;
if (argv[argi][1] == '-')
p = &argv[argi][2];
else
p = &argv[argi][1];
if (p == "h" || p == "help" || p == "?") {
Logger::Info
<< "The RFIGui is a program to analyze the time-frequency "
"information in radio astronomical observations.\n"
<< "It is written by André Offringa (offringa@gmail.com) and "
"published under the GPL 3.\n"
<< "This program is part of AOFlagger " << AOFLAGGER_VERSION_STR
<< " (" << AOFLAGGER_VERSION_DATE_STR << ")\n\n"
<< "Syntax:\n"
<< " rfigui [-option1 [-option2 ...]] [measurement set]\n\n"
<< "The main window will be opened when no parameters are "
"specified.\n"
<< "Possible options:\n"
<< " -help\n"
<< " Display this help message and exit.\n"
<< " -version\n"
<< " Display AOFlagger version and exit.\n"
<< " -v\n"
<< " Verbose logging.\n"
<< " -save-baseline <filename> <antenna1> <antenna2> <band> "
"<sequence index>\n"
<< " Save the selected baseline to the given filename. The "
"parameter can be specified\n"
<< " multiple times to save multiple baselines in one run. When "
"this parameter is specified,\n"
<< " the main window will not open and the program will exit "
"after saving the requested baselines.\n"
<< " -data-column <columnname>\n"
<< " Open the selected column name.\n"
<< " -hide-flags / -show-flags\n"
<< " Do not (or do) plot the flag mask on top of the data. "
"Default: plot them.\n";
return;
} else if (p == "version") {
Logger::Info << "AOFlagger " << AOFLAGGER_VERSION_STR << " ("
<< AOFLAGGER_VERSION_DATE_STR << ")\n";
return;
} else if (p == "save-baseline") {
SavedBaseline sb;
sb.filename = argv[argi + 1];
sb.a1Index = atoi(argv[argi + 2]);
sb.a2Index = atoi(argv[argi + 3]);
sb.bandIndex = atoi(argv[argi + 4]);
sb.sequenceIndex = atoi(argv[argi + 5]);
savedBaselines.insert(sb);
interactive = false;
argi += 5;
} else if (p == "data-column") {
++argi;
dataColumnName = argv[argi];
} else if (p == "hide-flags") {
plotFlags = false;
} else if (p == "show-flags") {
plotFlags = true;
} else if (p == "v") {
Logger::SetVerbosity(Logger::VerboseVerbosity);
} else {
Logger::Error << "Unknown parameter " << argv[argi]
<< " specified on command line.\n";
return;
}
} else {
filenames.push_back(argv[argi]);
}
++argi;
}
// We have to 'lie' about argc to create(..), because of a bug in older
// gtkmms.
int altArgc = 1;
RFIGuiController controller;
Glib::RefPtr<Gtk::Application> app;
std::unique_ptr<RFIGuiWindow> window;
if (interactive) {
app = Gtk::Application::create(altArgc, argv, "",
Gio::APPLICATION_HANDLES_OPEN);
window = std::make_unique<RFIGuiWindow>(&controller, argv[0]);
window->present();
}
try {
if (!filenames.empty()) {
if (interactive) {
window->OpenPaths(filenames);
} else {
Pango::init();
MSOptions options;
options.ioMode = DirectReadMode;
options.dataColumnName = dataColumnName;
options.combineSPWs = false;
options.intervalStart = intervalStart;
options.intervalEnd = intervalEnd;
options.baselineIntegration.enable = false;
controller.OpenMS(filenames, options);
}
}
if (!savedBaselines.empty()) {
imagesets::IndexableSet* imageSet =
dynamic_cast<imagesets::IndexableSet*>(&controller.GetImageSet());
if (imageSet == nullptr)
throw std::runtime_error(
"Option -save-baseline can only be used for measurement sets.\n");
for (const SavedBaseline& b : savedBaselines) {
auto index =
imageSet->Index(b.a1Index, b.a2Index, b.bandIndex, b.sequenceIndex);
if (!index) throw std::runtime_error("Baseline not found!");
controller.SetImageSetIndex(*index);
StdOutReporter reporter;
controller.LoadCurrentTFDataAsync(reporter);
controller.LoadCurrentTFDataFinish(true);
MaskedHeatMap& plot = controller.TFController().Plot();
plot.SetShowOriginalMask(plotFlags);
plot.SetShowXAxisDescription(true);
plot.SetShowYAxisDescription(true);
plot.SetShowZAxisDescription(true);
plot.SaveByExtension(b.filename, 800, 480);
}
}
if (interactive) app->run(*window);
} catch (const std::exception& e) {
Logger::Error << "\n"
"==========\n"
"An unhandled exception occured while executing RFIGui. "
"The error is:\n"
<< e.what() << '\n';
}
}
int main(int argc, char* argv[]) {
run(argc, argv);
Glib::Error::register_cleanup();
Glib::wrap_register_cleanup();
return 0;
}
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