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#include "combine.h"
#include "../structures/msmetadata.h"
namespace quality {
FileContents ReadAndCombine(const std::vector<std::string>& files,
bool verbose) {
FileContents result;
size_t n_polarizations = 0;
for (size_t i = 0; i != files.size(); ++i) {
const std::string& filename = files[i];
if (n_polarizations == 0) {
n_polarizations = MSMetaData::PolarizationCount(filename);
result.statistics_collection.SetPolarizationCount(n_polarizations);
result.histogram_collection.SetPolarizationCount(n_polarizations);
} else {
if (n_polarizations != MSMetaData::PolarizationCount(filename)) {
throw std::runtime_error(
"Can't combine measurement set quality statistics with different "
"number of polarizations");
}
}
if (verbose)
std::cout << " (" << (i + 1) << "/" << files.size() << ") Adding "
<< filename << " to statistics...\n";
QualityTablesFormatter qualityTables(filename);
StatisticsCollection statCollection(n_polarizations);
statCollection.Load(qualityTables);
result.statistics_collection.Add(statCollection);
HistogramTablesFormatter histogramTables(filename);
if (histogramTables.HistogramsExist()) {
HistogramCollection histCollection(n_polarizations);
histCollection.Load(histogramTables);
result.histogram_collection.Add(histCollection);
}
}
return result;
}
} // namespace quality
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