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#!/usr/bin/env bash
# Licensed to the Apache Software Foundation (ASF) under one
# or more contributor license agreements. See the NOTICE file
# distributed with this work for additional information
# regarding copyright ownership. The ASF licenses this file
# to you under the Apache License, Version 2.0 (the
# "License"); you may not use this file except in compliance
# with the License. You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing,
# software distributed under the License is distributed on an
# "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
# KIND, either express or implied. See the License for the
# specific language governing permissions and limitations
# under the License.
set -ex
: "${R_BIN:=R}"
# When revdep runs with > 1 worker the checks for {targets} time out for
# some reason.
: "${ARROW_REVDEP_WORKERS:=1}"
# But we do want to use all cores while building arrow to speed up the
# installation so this is used to set MAKEFLAGS
: "${N_JOBS:=$(nproc)}"
source_dir=${1}/r
# cpp building dependencies
# TODO(assignUser) consolidate cpp system reqs across docker files
apt update -y -q && \
apt install -y \
cmake \
libbrotli-dev \
libbz2-dev \
libc-ares-dev \
libcurl4-openssl-dev \
libgflags-dev \
libgoogle-glog-dev \
liblz4-dev \
libprotobuf-dev \
libprotoc-dev \
libradospp-dev \
libre2-dev \
libsnappy-dev \
libssl-dev \
libthrift-dev \
libutf8proc-dev \
libzstd-dev \
nlohmann-json3-dev \
pkg-config \
protobuf-compiler \
python3-dev \
python3-pip \
python3-rados \
rados-objclass-dev \
rapidjson-dev \
tzdata \
wget
# system dependencies needed for arrow's reverse dependencies
apt install -y libxml2-dev \
libfontconfig1-dev \
libcairo2-dev \
libglpk-dev \
libmysqlclient-dev \
unixodbc-dev \
libpq-dev \
coinor-libsymphony-dev \
coinor-libcgl-dev \
coinor-symphony \
libzmq3-dev \
libudunits2-dev \
libgdal-dev \
libgeos-dev \
libproj-dev
# We have to be in source_dir so that cpp source detection works
pushd "$source_dir"
printenv
# copy over cpp source
make sync-cpp
# By default, aws-sdk tries to contact a non-existing local ip host
# to retrieve metadata. Disable this so that S3FileSystem tests run faster.
export AWS_EC2_METADATA_DISABLED=TRUE
# Set crancache dir so we can cache it
export CRANCACHE_DIR="${1}/.crancache"
# One of the revdeps/system reqs creates an incomplete boost install
# in the cmake search path which breaks our build, so we don't use system boost
export EXTRA_CMAKE_FLAGS='-DBoost_SOURCE=BUNDLED'
export MAKEFLAGS=-j$N_JOBS
SCRIPT="
# We can't use RSPM binaries because we need source packages
options('repos' = c(CRAN = 'https://packagemanager.rstudio.com/all/latest'))
remotes::install_github('r-lib/revdepcheck')
# zoo is needed by RcisTarget tests, though only listed in enhances so not installed by revdepcheck
install.packages('zoo')
# actually run revdepcheck
revdepcheck::revdep_check(
quiet = FALSE,
timeout = as.difftime(120, units = 'mins'),
num_workers = $ARROW_REVDEP_WORKERS,
env = c(
ARROW_R_DEV = '$ARROW_R_DEV',
revdepcheck::revdep_env_vars()
))
revdepcheck::revdep_report(all = TRUE)
# Go through the summary and fail if any of the statuses include -
summary <- revdepcheck::revdep_summary()
failed <- lapply(summary, function(check) grepl('-', check[['status']]))
if (any(unlist(failed))) {
quit(status = 1)
}
"
echo "$SCRIPT" | ${R_BIN} --no-save
popd
|
