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# Licensed to the Apache Software Foundation (ASF) under one
# or more contributor license agreements. See the NOTICE file
# distributed with this work for additional information
# regarding copyright ownership. The ASF licenses this file
# to you under the Apache License, Version 2.0 (the
# "License"); you may not use this file except in compliance
# with the License. You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing,
# software distributed under the License is distributed on an
# "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
# KIND, either express or implied. See the License for the
# specific language governing permissions and limitations
# under the License.
#' Scan the contents of a dataset
#'
#' @description
#' A `Scanner` iterates over a [Dataset]'s fragments and returns data
#' according to given row filtering and column projection. A `ScannerBuilder`
#' can help create one.
#'
#' @section Factory:
#' `Scanner$create()` wraps the `ScannerBuilder` interface to make a `Scanner`.
#' It takes the following arguments:
#'
#' * `dataset`: A `Dataset` or `arrow_dplyr_query` object, as returned by the
#' `dplyr` methods on `Dataset`.
#' * `projection`: A character vector of column names to select columns or a
#' named list of expressions
#' * `filter`: A `Expression` to filter the scanned rows by, or `TRUE` (default)
#' to keep all rows.
#' * `use_threads`: logical: should scanning use multithreading? Default `TRUE`
#' * `...`: Additional arguments, currently ignored
#' @section Methods:
#' `ScannerBuilder` has the following methods:
#'
#' - `$Project(cols)`: Indicate that the scan should only return columns given
#' by `cols`, a character vector of column names or a named list of [Expression].
#' - `$Filter(expr)`: Filter rows by an [Expression].
#' - `$UseThreads(threads)`: logical: should the scan use multithreading?
#' The method's default input is `TRUE`, but you must call the method to enable
#' multithreading because the scanner default is `FALSE`.
#' - `$BatchSize(batch_size)`: integer: Maximum row count of scanned record
#' batches, default is 32K. If scanned record batches are overflowing memory
#' then this method can be called to reduce their size.
#' - `$schema`: Active binding, returns the [Schema] of the Dataset
#' - `$Finish()`: Returns a `Scanner`
#'
#' `Scanner` currently has a single method, `$ToTable()`, which evaluates the
#' query and returns an Arrow [Table].
#' @rdname Scanner
#' @name Scanner
#' @examplesIf arrow_with_dataset() & arrow_with_parquet()
#' # Set up directory for examples
#' tf <- tempfile()
#' dir.create(tf)
#' on.exit(unlink(tf))
#'
#' write_dataset(mtcars, tf, partitioning="cyl")
#'
#' ds <- open_dataset(tf)
#'
#' scan_builder <- ds$NewScan()
#' scan_builder$Filter(Expression$field_ref("hp") > 100)
#' scan_builder$Project(list(hp_times_ten = 10 * Expression$field_ref("hp")))
#'
#' # Once configured, call $Finish()
#' scanner <- scan_builder$Finish()
#'
#' # Can get results as a table
#' as.data.frame(scanner$ToTable())
#'
#' # Or as a RecordBatchReader
#' scanner$ToRecordBatchReader()
#' @export
Scanner <- R6Class(
"Scanner",
inherit = ArrowObject,
public = list(
ToTable = function() dataset___Scanner__ToTable(self),
ScanBatches = function() dataset___Scanner__ScanBatches(self),
ToRecordBatchReader = function() dataset___Scanner__ToRecordBatchReader(self),
CountRows = function() dataset___Scanner__CountRows(self)
),
active = list(
schema = function() dataset___Scanner__schema(self)
)
)
Scanner$create <- function(
dataset,
projection = NULL,
filter = TRUE,
use_threads = option_use_threads(),
batch_size = NULL,
fragment_scan_options = NULL,
...
) {
stop_if_no_datasets()
if (inherits(dataset, "arrow_dplyr_query")) {
if (is_collapsed(dataset)) {
# TODO: Is there a way to get a RecordBatchReader rather than evaluating?
dataset$.data <- as_adq(dplyr::compute(dataset$.data))$.data
}
proj <- c(dataset$selected_columns, dataset$temp_columns)
if (!is.null(projection)) {
if (is.character(projection)) {
stopifnot("attempting to project with unknown columns" = all(projection %in% names(proj)))
proj <- proj[projection]
} else {
# TODO: ARROW-13802 accepting lists of Expressions as a projection
warning(
"Scanner$create(projection = ...) must be a character vector, ",
"ignoring the projection argument."
)
}
}
if (!isTRUE(filter)) {
dataset <- set_filters(dataset, filter)
}
return(Scanner$create(
dataset$.data,
proj,
dataset$filtered_rows,
use_threads,
batch_size,
fragment_scan_options,
...
))
}
scanner_builder <- ScannerBuilder$create(dataset)
if (use_threads) {
scanner_builder$UseThreads()
}
if (!is.null(projection)) {
scanner_builder$Project(projection)
}
if (!isTRUE(filter)) {
scanner_builder$Filter(filter)
}
if (is_integerish(batch_size)) {
scanner_builder$BatchSize(batch_size)
}
if (!is.null(fragment_scan_options)) {
scanner_builder$FragmentScanOptions(fragment_scan_options)
}
scanner_builder$Finish()
}
#' @export
names.Scanner <- function(x) names(x$schema)
#' @export
head.Scanner <- function(x, n = 6L, ...) {
assert_is(n, c("numeric", "integer"))
assert_that(length(n) == 1)
# Negative n requires knowing nrow(x), which requires a scan itself
assert_that(n >= 0)
if (!is.integer(n)) {
n <- floor(n)
}
dataset___Scanner__head(x, floor(n))
}
#' @export
tail.Scanner <- function(x, n = 6L, ...) {
tail_from_batches(dataset___Scanner__ScanBatches(x), n)$read_table()
}
tail_from_batches <- function(batches, n) {
assert_is(n, c("numeric", "integer"))
assert_that(length(n) == 1)
# Negative n requires knowing nrow(x), which requires a scan itself
assert_that(n >= 0)
if (!is.integer(n)) {
n <- floor(n)
}
result <- list()
batch_num <- 0
# Given a list of batches, iterate from the back
for (batch in rev(batches)) {
batch_num <- batch_num + 1
result[[batch_num]] <- tail(batch, n)
n <- n - nrow(batch)
if (n <= 0) break
}
# rev() the result to put the batches back in the right order
RecordBatchReader$create(batches = rev(result))
}
#' Apply a function to a stream of RecordBatches
#'
#' As an alternative to calling `collect()` on a `Dataset` query, you can
#' use this function to access the stream of `RecordBatch`es in the `Dataset`.
#' This lets you do more complex operations in R that operate on chunks of data
#' without having to hold the entire Dataset in memory at once. You can include
#' `map_batches()` in a dplyr pipeline and do additional dplyr methods on the
#' stream of data in Arrow after it.
#'
#' This is experimental and not recommended for production use. It is also
#' single-threaded and runs in R not C++, so it won't be as fast as core
#' Arrow methods.
#'
#' @param X A `Dataset` or `arrow_dplyr_query` object, as returned by the
#' `dplyr` methods on `Dataset`.
#' @param FUN A function or `purrr`-style lambda expression to apply to each
#' batch. It must return a RecordBatch or something coercible to one via
#' `as_record_batch()'.
#' @param .schema An optional [schema()]. If NULL, the schema will be inferred
#' from the first batch.
#' @param .lazy Use `TRUE` to evaluate `FUN` lazily as batches are read from
#' the result; use `FALSE` to evaluate `FUN` on all batches before returning
#' the reader.
#' @param ... Additional arguments passed to `FUN`
#' @param .data.frame Deprecated argument, ignored
#' @return An `arrow_dplyr_query`.
#' @export
map_batches <- function(X, FUN, ..., .schema = NULL, .lazy = TRUE, .data.frame = NULL) {
if (!is.null(.data.frame)) {
warning(
"The .data.frame argument is deprecated. ",
"Call collect() on the result to get a data.frame.",
call. = FALSE
)
}
FUN <- as_mapper(FUN)
reader <- as_record_batch_reader(X)
dots <- list2(...)
# If no schema is supplied, we have to evaluate the first batch here
if (is.null(.schema)) {
batch <- reader$read_next_batch()
if (is.null(batch)) {
abort("Can't infer schema from a RecordBatchReader with zero batches")
}
first_result <- as_record_batch(do.call(FUN, c(list(batch), dots)))
.schema <- first_result$schema
fun <- function() {
if (!is.null(first_result)) {
result <- first_result
first_result <<- NULL
result
} else {
batch <- reader$read_next_batch()
if (is.null(batch)) {
NULL
} else {
as_record_batch(
do.call(FUN, c(list(batch), dots)),
schema = .schema
)
}
}
}
} else {
fun <- function() {
batch <- reader$read_next_batch()
if (is.null(batch)) {
return(NULL)
}
as_record_batch(
do.call(FUN, c(list(batch), dots)),
schema = .schema
)
}
}
reader_out <- as_record_batch_reader(fun, schema = .schema)
if (!.lazy) {
reader_out <- RecordBatchReader$create(
batches = reader_out$batches(),
schema = .schema
)
}
reader_out
}
#' @usage NULL
#' @format NULL
#' @rdname Scanner
#' @export
ScannerBuilder <- R6Class(
"ScannerBuilder",
inherit = ArrowObject,
public = list(
Project = function(cols) {
# cols is either a character vector or a named list of Expressions
if (is.character(cols)) {
dataset___ScannerBuilder__ProjectNames(self, cols)
} else if (length(cols) == 0) {
# Empty projection
dataset___ScannerBuilder__ProjectNames(self, character(0))
} else {
# List of Expressions
dataset___ScannerBuilder__ProjectExprs(self, cols, names(cols))
}
self
},
Filter = function(expr) {
assert_is(expr, "Expression")
dataset___ScannerBuilder__Filter(self, expr)
self
},
UseThreads = function(threads = option_use_threads()) {
dataset___ScannerBuilder__UseThreads(self, threads)
self
},
BatchSize = function(batch_size) {
dataset___ScannerBuilder__BatchSize(self, batch_size)
self
},
FragmentScanOptions = function(options) {
dataset___ScannerBuilder__FragmentScanOptions(self, options)
self
},
Finish = function() dataset___ScannerBuilder__Finish(self)
),
active = list(
schema = function() dataset___ScannerBuilder__schema(self)
)
)
ScannerBuilder$create <- function(dataset) {
if (inherits(dataset, "RecordBatchReader")) {
return(dataset___ScannerBuilder__FromRecordBatchReader(dataset))
}
if (inherits(dataset, c("data.frame", "ArrowTabular"))) {
dataset <- InMemoryDataset$create(dataset)
}
assert_is(dataset, "Dataset")
dataset$NewScan()
}
#' @export
names.ScannerBuilder <- function(x) names(x$schema)
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