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// =============================================================== //
// //
// File : ps_merge_my_dbs.cxx //
// Purpose : //
// //
// Coded by Wolfram Foerster in October 2002 //
// Institute of Microbiology (Technical University Munich) //
// http://www.arb-home.de/ //
// //
// =============================================================== //
#include "ps_tools.hxx"
#include "ps_database.hxx"
#include <sys/times.h>
// ====================================================
int main(int argc, char *argv[]) {
if (argc < 3) {
printf("Missing arguments\n Usage %s <output database name> <input database name> <input database name2> [[input3]...]\n", argv[0]);
exit(1);
}
//
// init database object
//
const char *input_DB_name = argv[2];
struct tms before;
times(&before);
printf("Opening 1st input-probe-set-database '%s'..\n", input_DB_name);
PS_Database *db = new PS_Database(input_DB_name, PS_Database::READONLY);
db->load();
PS_print_time_diff(&before, "(enter to continue) ");
//
// merge in other databasefiles
//
for (int i = 3; i < argc; ++i) {
input_DB_name = argv[i];
printf("Appending input-probe-set-database '%s'..\n", input_DB_name);
times(&before);
db->merge(input_DB_name);
PS_print_time_diff(&before);
}
printf("Merged databases (enter to continue)\n");
//
// write one big whole tree to file
//
const char *output_DB_name = argv[1];
times(&before);
printf("Writing output-probe-set-database '%s'..\n", output_DB_name);
db->saveTo(output_DB_name);
PS_print_time_diff(&before, "(enter to continue) ");
printf("cleaning up...\n");
if (db) delete db;
return 0;
}
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