File: dist.arb

package info (click to toggle)
arb 6.0.6-8
  • links: PTS, VCS
  • area: non-free
  • in suites: sid, trixie
  • size: 66,204 kB
  • sloc: ansic: 394,911; cpp: 250,290; makefile: 19,644; sh: 15,879; perl: 10,473; fortran: 6,019; ruby: 683; xml: 503; python: 53; awk: 32
file content (88 lines) | stat: -rw-r--r-- 1,335 bytes parent folder | download | duplicates (6)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
/*ARBDB ASCII*/
window	%% (%
	font		"8x13bold"
	background		"#ddf"
	foreground		"black"
	color_1		"red"
	color_2		"green"
	color_3		"blue"
	windows	%% (%
		PHYL_MATRIX	%% (%
			width	%i 460
			height	%i 640
			posx	%i 10
			posy	%i 10
			%) /*PHYL_MATRIX*/

		NEIGHBOUR_JOINING	%% (%
			width	%i 460
			height	%i 675
			posx	%i 612
			posy	%i 114
			%) /*NEIGHBOUR_JOINING*/

		HELP_WINDOW	%% (%
			width	%i 720
			height	%i 680
			posx	%i 378
			posy	%i 0
			%) /*HELP_WINDOW*/

		WINDOW_PROPERTIES	%% (%
			width	%i 596
			height	%i 332
			posx	%i 422
			posy	%i 110
			%) /*WINDOW_PROPERTIES*/

		%) /*windows*/

	%) /*window*/

dist	%% (%
	which_species		"marked"
	alignment		""
	filter	%% (%
		alignment		"none"
		name		"none"
		filter		""
		cancel		".0-"
		%) /*filter*/

	weights	%% (%
		name		"none"
		alignment		"none"
		%) /*weights*/

	rates	%% (%
		name		"none"
		%) /*rates*/

	cancel	%% (%
		chars		"-."
		%) /*cancel*/

	correction	%% (%
		trans	%i 0
		%) /*correction*/

	tree	%% (%
		tree_name		"tree_temp"
		%) /*tree*/

	alpha	%f 1.000000
	ratematrix	%% (%
		val_2_1	%f 1.000000
		val_4_1	%f 1.000000
		val_4_2	%f 1.000000
		val_8_1	%f 1.000000
		val_8_2	%f 1.000000
		val_8_4	%f 1.000000
		val_16_1	%f 1.000000
		val_16_2	%f 1.000000
		val_16_4	%f 1.000000
		val_16_8	%f 1.000000
		%) /*ratematrix*/

	%) /*dist*/