File: doc-base

package info (click to toggle)
arden 1.0-5
  • links: PTS, VCS
  • area: main
  • in suites: bullseye, sid
  • size: 2,004 kB
  • sloc: python: 1,547; makefile: 2
file content (17 lines) | stat: -rw-r--r-- 783 bytes parent folder | download | duplicates (4)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
Document: arden
Title: Documentation for ARDEN scripts and API
Author: Sven H. Giese
Abstract: specificity control for read alignments using an artificial reference
 ARDEN (Artificial Reference Driven Estimation of false positives in NGS
 data) is a novel benchmark that estimates error rates based on real
 experimental reads and an additionally generated artificial reference
 genome. It allows the computation of error rates specifically for a
 dataset and the construction of a ROC-curve. Thereby, it can be used to
 optimize parameters for read mappers, to select read mappers for a
 specific problem or also to filter alignments based on quality
 estimation.
Section: Science/Biology

Format: html
Files: /usr/share/doc/arden/html/*
Index: /usr/share/doc/arden/html/index.html