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Script arden_analyze
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<h1 class="epydoc">Script arden_analyze</h1><p class="nomargin-top"></p>
<p>Created on Thu Aug 18 2012</p>
<p>Script for analyzing mapping results using an artificial reference
genome (ART / ARG). An exhaustive comparison is performed between the
input files (SAM format). The goal is to calculate a ROC curve and the
AUC value to compare different read mapper / different settings on the
same read mapper. Therefore FP and TP have to be identified. The TP are
from the original reference. The FP are from the ART and are defined as
unique mappings in a sense that no FP alignment occurs on the
reference.</p>
<hr />
<div class="fields"> <p><strong>Author:</strong>
Sven Giese
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