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/*
* Copyright (c) 2006 Genome Research Limited.
*
* This program is free software; you can redistribute it and/or modify
* it under the terms of the GNU Library General Public License as published
* by the Free Software Foundation; either version 2 of the License or
* (at your option) any later version.
*
* This program is distributed in the hope that it will be useful, but
* WITHOUT ANY WARRANTY; without even the implied warranty of
* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
* GNU Library General Public License for more details.
*
* You should have received a copy of the GNU Library General Public License
* along with this program; see the file COPYING.LIB. If not, write to
* the Free Software Foundation Inc., 59 Temple Place - Suite 330,
* Boston, MA 02111-1307 USA
*/
package org.gmod.schema.dao;
import java.util.List;
import org.gmod.schema.cv.CvTerm;
import org.gmod.schema.general.DbXRef;
import org.gmod.schema.pub.Pub;
import org.gmod.schema.pub.PubProp;
import org.gmod.schema.pub.PubDbXRef;
public interface PubDaoI extends BaseDaoI {
/**
* Retrieve the publication with this primary key
*
* @param id the publication id
* @return the corresponding publication, or null
*/
public abstract Pub getPubById(int id);
/**
* Retrieve the publication with this primary key
*
* @param uniqueName
* @return the publication with this unique name, or null
*/
public abstract Pub getPubByUniqueName(String uniqueName);
public Pub getPubByDbXRef(DbXRef dbXRef);
/**
* Get a list of all PubDbXRef's
* @return list of PubDbXRef's
*/
public List<PubDbXRef> getPubDbXRef();
/**
* Retrieve the publication property with Pub and Cvterm
*
* @param pub the Publication
* @param cvTerm the cvTerm
* @return the publication or null
*/
public abstract List<PubProp> getPubPropByPubAndCvTerm(Pub pub,CvTerm cvTerm);
}
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