1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
|
#!/bin/bash
##################################################
# Script that can be used to set up specific #
# environment variables for Artemis and related #
# applications. #
# Uncomment as required and run before startup. #
# #
##################################################
#
# Set the location of a specific JRE to use
# for all Artemis related applications.
#
#export ARTEMIS_JAVA_JRE=
#
# Set specific java JVM flags for memory management etc.
#
#export ARTEMIS_JVM_FLAGS=
#
# Chado database connectivity.
#
#export PGHOST=
#export PGPORT=
#export PGDATABASE=
#export PGUSER=
#
# Specify locally installed Blast databases,
# e.g. /data/blastdb/Supported/UNIPROT/current:/data/blastdb/Supported/EMBL/current/con etc
#
#export BLASTDB=
|
