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# Licensed under a 3-clause BSD style license - see LICENSE.rst
"""
This module contains a number of utilities for use during
setup/build/packaging that are useful to astropy as a whole.
"""
from __future__ import absolute_import, print_function
import collections
import os
import re
import subprocess
import sys
import traceback
import warnings
from distutils import log
from distutils.errors import DistutilsOptionError, DistutilsModuleError
from distutils.core import Extension
from distutils.core import Command
from distutils.command.sdist import sdist as DistutilsSdist
from setuptools import find_packages as _find_packages
from .distutils_helpers import (add_command_option, get_compiler_option,
get_dummy_distribution, get_distutils_build_option,
get_distutils_build_or_install_option)
from .version_helpers import get_pkg_version_module
from .utils import (walk_skip_hidden, import_file, extends_doc,
resolve_name, AstropyDeprecationWarning)
from .commands.build_ext import generate_build_ext_command
from .commands.test import AstropyTest
# These imports are not used in this module, but are included for backwards
# compat with older versions of this module
from .utils import get_numpy_include_path, write_if_different # noqa
from .commands.build_ext import should_build_with_cython, get_compiler_version # noqa
__all__ = ['register_commands', 'get_package_info']
_module_state = {'registered_commands': None,
'have_sphinx': False,
'package_cache': None,
'exclude_packages': set(),
'excludes_too_late': False}
try:
import sphinx # noqa
_module_state['have_sphinx'] = True
except ValueError as e:
# This can occur deep in the bowels of Sphinx's imports by way of docutils
# and an occurrence of this bug: http://bugs.python.org/issue18378
# In this case sphinx is effectively unusable
if 'unknown locale' in e.args[0]:
log.warn(
"Possible misconfiguration of one of the environment variables "
"LC_ALL, LC_CTYPES, LANG, or LANGUAGE. For an example of how to "
"configure your system's language environment on OSX see "
"http://blog.remibergsma.com/2012/07/10/"
"setting-locales-correctly-on-mac-osx-terminal-application/")
except ImportError:
pass
except SyntaxError:
# occurs if markupsafe is recent version, which doesn't support Python 3.2
pass
def adjust_compiler(package):
"""
This function detects broken compilers and switches to another. If
the environment variable CC is explicitly set, or a compiler is
specified on the commandline, no override is performed -- the purpose
here is to only override a default compiler.
The specific compilers with problems are:
* The default compiler in XCode-4.2, llvm-gcc-4.2,
segfaults when compiling wcslib.
The set of broken compilers can be updated by changing the
compiler_mapping variable. It is a list of 2-tuples where the
first in the pair is a regular expression matching the version
of the broken compiler, and the second is the compiler to change
to.
"""
warnings.warn(
'Direct use of the adjust_compiler function in setup.py is '
'deprecated and can be removed from your setup.py. This '
'functionality is now incorporated directly into the build_ext '
'command.', AstropyDeprecationWarning)
def get_debug_option(packagename):
""" Determines if the build is in debug mode.
Returns
-------
debug : bool
True if the current build was started with the debug option, False
otherwise.
"""
try:
current_debug = get_pkg_version_module(packagename,
fromlist=['debug'])[0]
except (ImportError, AttributeError):
current_debug = None
# Only modify the debug flag if one of the build commands was explicitly
# run (i.e. not as a sub-command of something else)
dist = get_dummy_distribution()
if any(cmd in dist.commands for cmd in ['build', 'build_ext']):
debug = bool(get_distutils_build_option('debug'))
else:
debug = bool(current_debug)
if current_debug is not None and current_debug != debug:
build_ext_cmd = dist.get_command_class('build_ext')
build_ext_cmd.force_rebuild = True
return debug
def add_exclude_packages(excludes):
if _module_state['excludes_too_late']:
raise RuntimeError(
"add_package_excludes must be called before all other setup helper "
"functions in order to properly handle excluded packages")
_module_state['exclude_packages'].update(set(excludes))
def register_commands(package, version, release, srcdir='.'):
if _module_state['registered_commands'] is not None:
return _module_state['registered_commands']
if _module_state['have_sphinx']:
try:
from .commands.build_sphinx import (AstropyBuildSphinx,
AstropyBuildDocs)
except ImportError:
AstropyBuildSphinx = AstropyBuildDocs = FakeBuildSphinx
else:
AstropyBuildSphinx = AstropyBuildDocs = FakeBuildSphinx
_module_state['registered_commands'] = registered_commands = {
'test': generate_test_command(package),
# Use distutils' sdist because it respects package_data.
# setuptools/distributes sdist requires duplication of information in
# MANIFEST.in
'sdist': DistutilsSdist,
# The exact form of the build_ext command depends on whether or not
# we're building a release version
'build_ext': generate_build_ext_command(package, release),
'build_sphinx': AstropyBuildSphinx,
'build_docs': AstropyBuildDocs
}
# Need to override the __name__ here so that the commandline options are
# presented as being related to the "build" command, for example; normally
# this wouldn't be necessary since commands also have a command_name
# attribute, but there is a bug in distutils' help display code that it
# uses __name__ instead of command_name. Yay distutils!
for name, cls in registered_commands.items():
cls.__name__ = name
# Add a few custom options; more of these can be added by specific packages
# later
for option in [
('use-system-libraries',
"Use system libraries whenever possible", True)]:
add_command_option('build', *option)
add_command_option('install', *option)
add_command_hooks(registered_commands, srcdir=srcdir)
return registered_commands
def add_command_hooks(commands, srcdir='.'):
"""
Look through setup_package.py modules for functions with names like
``pre_<command_name>_hook`` and ``post_<command_name>_hook`` where
``<command_name>`` is the name of a ``setup.py`` command (e.g. build_ext).
If either hook is present this adds a wrapped version of that command to
the passed in ``commands`` `dict`. ``commands`` may be pre-populated with
other custom distutils command classes that should be wrapped if there are
hooks for them (e.g. `AstropyBuildPy`).
"""
hook_re = re.compile(r'^(pre|post)_(.+)_hook$')
# Distutils commands have a method of the same name, but it is not a
# *classmethod* (which probably didn't exist when distutils was first
# written)
def get_command_name(cmdcls):
if hasattr(cmdcls, 'command_name'):
return cmdcls.command_name
else:
return cmdcls.__name__
packages = find_packages(srcdir)
dist = get_dummy_distribution()
hooks = collections.defaultdict(dict)
for setuppkg in iter_setup_packages(srcdir, packages):
for name, obj in vars(setuppkg).items():
match = hook_re.match(name)
if not match:
continue
hook_type = match.group(1)
cmd_name = match.group(2)
if hook_type not in hooks[cmd_name]:
hooks[cmd_name][hook_type] = []
hooks[cmd_name][hook_type].append((setuppkg.__name__, obj))
for cmd_name, cmd_hooks in hooks.items():
commands[cmd_name] = generate_hooked_command(
cmd_name, dist.get_command_class(cmd_name), cmd_hooks)
def generate_hooked_command(cmd_name, cmd_cls, hooks):
"""
Returns a generated subclass of ``cmd_cls`` that runs the pre- and
post-command hooks for that command before and after the ``cmd_cls.run``
method.
"""
def run(self, orig_run=cmd_cls.run):
self.run_command_hooks('pre_hooks')
orig_run(self)
self.run_command_hooks('post_hooks')
return type(cmd_name, (cmd_cls, object),
{'run': run, 'run_command_hooks': run_command_hooks,
'pre_hooks': hooks.get('pre', []),
'post_hooks': hooks.get('post', [])})
def run_command_hooks(cmd_obj, hook_kind):
"""Run hooks registered for that command and phase.
*cmd_obj* is a finalized command object; *hook_kind* is either
'pre_hook' or 'post_hook'.
"""
hooks = getattr(cmd_obj, hook_kind, None)
if not hooks:
return
for modname, hook in hooks:
if isinstance(hook, str):
try:
hook_obj = resolve_name(hook)
except ImportError as exc:
raise DistutilsModuleError(
'cannot find hook {0}: {1}'.format(hook, exc))
else:
hook_obj = hook
if not callable(hook_obj):
raise DistutilsOptionError('hook {0!r} is not callable' % hook)
log.info('running {0} from {1} for {2} command'.format(
hook_kind.rstrip('s'), modname, cmd_obj.get_command_name()))
try:
hook_obj(cmd_obj)
except Exception:
log.error('{0} command hook {1} raised an exception: %s\n'.format(
hook_obj.__name__, cmd_obj.get_command_name()))
log.error(traceback.format_exc())
sys.exit(1)
def generate_test_command(package_name):
"""
Creates a custom 'test' command for the given package which sets the
command's ``package_name`` class attribute to the name of the package being
tested.
"""
return type(package_name.title() + 'Test', (AstropyTest,),
{'package_name': package_name})
def update_package_files(srcdir, extensions, package_data, packagenames,
package_dirs):
"""
This function is deprecated and maintained for backward compatibility
with affiliated packages. Affiliated packages should update their
setup.py to use `get_package_info` instead.
"""
info = get_package_info(srcdir)
extensions.extend(info['ext_modules'])
package_data.update(info['package_data'])
packagenames = list(set(packagenames + info['packages']))
package_dirs.update(info['package_dir'])
def get_package_info(srcdir='.', exclude=()):
"""
Collates all of the information for building all subpackages
and returns a dictionary of keyword arguments that can
be passed directly to `distutils.setup`.
The purpose of this function is to allow subpackages to update the
arguments to the package's ``setup()`` function in its setup.py
script, rather than having to specify all extensions/package data
directly in the ``setup.py``. See Astropy's own
``setup.py`` for example usage and the Astropy development docs
for more details.
This function obtains that information by iterating through all
packages in ``srcdir`` and locating a ``setup_package.py`` module.
This module can contain the following functions:
``get_extensions()``, ``get_package_data()``,
``get_build_options()``, and ``get_external_libraries()``.
Each of those functions take no arguments.
- ``get_extensions`` returns a list of
`distutils.extension.Extension` objects.
- ``get_package_data()`` returns a dict formatted as required by
the ``package_data`` argument to ``setup()``.
- ``get_build_options()`` returns a list of tuples describing the
extra build options to add.
- ``get_external_libraries()`` returns
a list of libraries that can optionally be built using external
dependencies.
"""
ext_modules = []
packages = []
package_data = {}
package_dir = {}
if exclude:
warnings.warn(
"Use of the exclude parameter is no longer supported since it does "
"not work as expected. Use add_exclude_packages instead. Note that "
"it must be called prior to any other calls from setup helpers.",
AstropyDeprecationWarning)
# Use the find_packages tool to locate all packages and modules
packages = find_packages(srcdir, exclude=exclude)
# Update package_dir if the package lies in a subdirectory
if srcdir != '.':
package_dir[''] = srcdir
# For each of the setup_package.py modules, extract any
# information that is needed to install them. The build options
# are extracted first, so that their values will be available in
# subsequent calls to `get_extensions`, etc.
for setuppkg in iter_setup_packages(srcdir, packages):
if hasattr(setuppkg, 'get_build_options'):
options = setuppkg.get_build_options()
for option in options:
add_command_option('build', *option)
if hasattr(setuppkg, 'get_external_libraries'):
libraries = setuppkg.get_external_libraries()
for library in libraries:
add_external_library(library)
for setuppkg in iter_setup_packages(srcdir, packages):
# get_extensions must include any Cython extensions by their .pyx
# filename.
if hasattr(setuppkg, 'get_extensions'):
ext_modules.extend(setuppkg.get_extensions())
if hasattr(setuppkg, 'get_package_data'):
package_data.update(setuppkg.get_package_data())
# Locate any .pyx files not already specified, and add their extensions in.
# The default include dirs include numpy to facilitate numerical work.
ext_modules.extend(get_cython_extensions(srcdir, packages, ext_modules,
['numpy']))
# Now remove extensions that have the special name 'skip_cython', as they
# exist Only to indicate that the cython extensions shouldn't be built
for i, ext in reversed(list(enumerate(ext_modules))):
if ext.name == 'skip_cython':
del ext_modules[i]
# On Microsoft compilers, we need to pass the '/MANIFEST'
# commandline argument. This was the default on MSVC 9.0, but is
# now required on MSVC 10.0, but it doesn't seem to hurt to add
# it unconditionally.
if get_compiler_option() == 'msvc':
for ext in ext_modules:
ext.extra_link_args.append('/MANIFEST')
return {
'ext_modules': ext_modules,
'packages': packages,
'package_dir': package_dir,
'package_data': package_data,
}
def iter_setup_packages(srcdir, packages):
""" A generator that finds and imports all of the ``setup_package.py``
modules in the source packages.
Returns
-------
modgen : generator
A generator that yields (modname, mod), where `mod` is the module and
`modname` is the module name for the ``setup_package.py`` modules.
"""
for packagename in packages:
package_parts = packagename.split('.')
package_path = os.path.join(srcdir, *package_parts)
setup_package = os.path.relpath(
os.path.join(package_path, 'setup_package.py'))
if os.path.isfile(setup_package):
module = import_file(setup_package,
name=packagename + '.setup_package')
yield module
def iter_pyx_files(package_dir, package_name):
"""
A generator that yields Cython source files (ending in '.pyx') in the
source packages.
Returns
-------
pyxgen : generator
A generator that yields (extmod, fullfn) where `extmod` is the
full name of the module that the .pyx file would live in based
on the source directory structure, and `fullfn` is the path to
the .pyx file.
"""
for dirpath, dirnames, filenames in walk_skip_hidden(package_dir):
for fn in filenames:
if fn.endswith('.pyx'):
fullfn = os.path.relpath(os.path.join(dirpath, fn))
# Package must match file name
extmod = '.'.join([package_name, fn[:-4]])
yield (extmod, fullfn)
break # Don't recurse into subdirectories
def get_cython_extensions(srcdir, packages, prevextensions=tuple(),
extincludedirs=None):
"""
Looks for Cython files and generates Extensions if needed.
Parameters
----------
srcdir : str
Path to the root of the source directory to search.
prevextensions : list of `~distutils.core.Extension` objects
The extensions that are already defined. Any .pyx files already here
will be ignored.
extincludedirs : list of str or None
Directories to include as the `include_dirs` argument to the generated
`~distutils.core.Extension` objects.
Returns
-------
exts : list of `~distutils.core.Extension` objects
The new extensions that are needed to compile all .pyx files (does not
include any already in `prevextensions`).
"""
# Vanilla setuptools and old versions of distribute include Cython files
# as .c files in the sources, not .pyx, so we cannot simply look for
# existing .pyx sources in the previous sources, but we should also check
# for .c files with the same remaining filename. So we look for .pyx and
# .c files, and we strip the extension.
prevsourcepaths = []
ext_modules = []
for ext in prevextensions:
for s in ext.sources:
if s.endswith(('.pyx', '.c', '.cpp')):
sourcepath = os.path.realpath(os.path.splitext(s)[0])
prevsourcepaths.append(sourcepath)
for package_name in packages:
package_parts = package_name.split('.')
package_path = os.path.join(srcdir, *package_parts)
for extmod, pyxfn in iter_pyx_files(package_path, package_name):
sourcepath = os.path.realpath(os.path.splitext(pyxfn)[0])
if sourcepath not in prevsourcepaths:
ext_modules.append(Extension(extmod, [pyxfn],
include_dirs=extincludedirs))
return ext_modules
class DistutilsExtensionArgs(collections.defaultdict):
"""
A special dictionary whose default values are the empty list.
This is useful for building up a set of arguments for
`distutils.Extension` without worrying whether the entry is
already present.
"""
def __init__(self, *args, **kwargs):
def default_factory():
return []
super(DistutilsExtensionArgs, self).__init__(
default_factory, *args, **kwargs)
def update(self, other):
for key, val in other.items():
self[key].extend(val)
def pkg_config(packages, default_libraries, executable='pkg-config'):
"""
Uses pkg-config to update a set of distutils Extension arguments
to include the flags necessary to link against the given packages.
If the pkg-config lookup fails, default_libraries is applied to
libraries.
Parameters
----------
packages : list of str
A list of pkg-config packages to look up.
default_libraries : list of str
A list of library names to use if the pkg-config lookup fails.
Returns
-------
config : dict
A dictionary containing keyword arguments to
`distutils.Extension`. These entries include:
- ``include_dirs``: A list of include directories
- ``library_dirs``: A list of library directories
- ``libraries``: A list of libraries
- ``define_macros``: A list of macro defines
- ``undef_macros``: A list of macros to undefine
- ``extra_compile_args``: A list of extra arguments to pass to
the compiler
"""
flag_map = {'-I': 'include_dirs', '-L': 'library_dirs', '-l': 'libraries',
'-D': 'define_macros', '-U': 'undef_macros'}
command = "{0} --libs --cflags {1}".format(executable, ' '.join(packages)),
result = DistutilsExtensionArgs()
try:
pipe = subprocess.Popen(command, shell=True, stdout=subprocess.PIPE)
output = pipe.communicate()[0].strip()
except subprocess.CalledProcessError as e:
lines = [
("{0} failed. This may cause the build to fail below."
.format(executable)),
" command: {0}".format(e.cmd),
" returncode: {0}".format(e.returncode),
" output: {0}".format(e.output)
]
log.warn('\n'.join(lines))
result['libraries'].extend(default_libraries)
else:
if pipe.returncode != 0:
lines = [
"pkg-config could not lookup up package(s) {0}.".format(
", ".join(packages)),
"This may cause the build to fail below."
]
log.warn('\n'.join(lines))
result['libraries'].extend(default_libraries)
else:
for token in output.split():
# It's not clear what encoding the output of
# pkg-config will come to us in. It will probably be
# some combination of pure ASCII (for the compiler
# flags) and the filesystem encoding (for any argument
# that includes directories or filenames), but this is
# just conjecture, as the pkg-config documentation
# doesn't seem to address it.
arg = token[:2].decode('ascii')
value = token[2:].decode(sys.getfilesystemencoding())
if arg in flag_map:
if arg == '-D':
value = tuple(value.split('=', 1))
result[flag_map[arg]].append(value)
else:
result['extra_compile_args'].append(value)
return result
def add_external_library(library):
"""
Add a build option for selecting the internal or system copy of a library.
Parameters
----------
library : str
The name of the library. If the library is `foo`, the build
option will be called `--use-system-foo`.
"""
for command in ['build', 'build_ext', 'install']:
add_command_option(command, str('use-system-' + library),
'Use the system {0} library'.format(library),
is_bool=True)
def use_system_library(library):
"""
Returns `True` if the build configuration indicates that the given
library should use the system copy of the library rather than the
internal one.
For the given library `foo`, this will be `True` if
`--use-system-foo` or `--use-system-libraries` was provided at the
commandline or in `setup.cfg`.
Parameters
----------
library : str
The name of the library
Returns
-------
use_system : bool
`True` if the build should use the system copy of the library.
"""
return (
get_distutils_build_or_install_option('use_system_{0}'.format(library)) or
get_distutils_build_or_install_option('use_system_libraries'))
@extends_doc(_find_packages)
def find_packages(where='.', exclude=(), invalidate_cache=False):
"""
This version of ``find_packages`` caches previous results to speed up
subsequent calls. Use ``invalide_cache=True`` to ignore cached results
from previous ``find_packages`` calls, and repeat the package search.
"""
if exclude:
warnings.warn(
"Use of the exclude parameter is no longer supported since it does "
"not work as expected. Use add_exclude_packages instead. Note that "
"it must be called prior to any other calls from setup helpers.",
AstropyDeprecationWarning)
# Calling add_exclude_packages after this point will have no effect
_module_state['excludes_too_late'] = True
if not invalidate_cache and _module_state['package_cache'] is not None:
return _module_state['package_cache']
packages = _find_packages(
where=where, exclude=list(_module_state['exclude_packages']))
_module_state['package_cache'] = packages
return packages
class FakeBuildSphinx(Command):
"""
A dummy build_sphinx command that is called if Sphinx is not
installed and displays a relevant error message
"""
# user options inherited from sphinx.setup_command.BuildDoc
user_options = [
('fresh-env', 'E', ''),
('all-files', 'a', ''),
('source-dir=', 's', ''),
('build-dir=', None, ''),
('config-dir=', 'c', ''),
('builder=', 'b', ''),
('project=', None, ''),
('version=', None, ''),
('release=', None, ''),
('today=', None, ''),
('link-index', 'i', '')]
# user options appended in astropy.setup_helpers.AstropyBuildSphinx
user_options.append(('warnings-returncode', 'w', ''))
user_options.append(('clean-docs', 'l', ''))
user_options.append(('no-intersphinx', 'n', ''))
user_options.append(('open-docs-in-browser', 'o', ''))
def initialize_options(self):
try:
raise RuntimeError("Sphinx and its dependencies must be installed "
"for build_docs.")
except:
log.error('error: Sphinx and its dependencies must be installed '
'for build_docs.')
sys.exit(1)
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