1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253 254 255 256 257 258 259 260 261 262 263 264 265 266 267 268 269 270 271 272 273 274 275 276 277 278 279 280 281 282 283 284 285 286 287 288 289 290 291 292 293 294 295 296 297 298 299 300 301 302 303 304 305 306 307 308 309 310 311 312 313 314 315 316 317 318 319 320 321 322 323 324 325 326 327 328 329 330 331 332 333 334 335 336 337 338 339 340 341 342 343 344 345 346 347 348 349 350 351 352 353 354 355 356 357 358 359 360 361 362 363 364 365 366 367 368 369 370 371 372 373 374 375 376 377 378 379 380 381 382 383 384 385 386 387 388 389 390 391 392 393 394 395 396 397 398 399 400 401 402 403 404 405 406 407 408 409 410 411 412 413 414 415 416 417 418 419 420 421 422 423 424 425 426 427 428 429 430 431 432 433 434 435 436 437 438 439 440 441 442 443 444 445 446 447 448 449 450 451 452 453 454 455 456 457 458 459 460 461 462 463 464 465 466 467 468 469 470 471 472 473 474 475 476 477 478 479 480 481 482 483 484 485 486 487 488 489 490 491 492 493 494 495 496 497 498 499 500 501 502 503 504 505 506 507 508 509 510 511 512 513 514 515 516 517 518 519 520 521 522 523
|
/*
* SPDX-FileCopyrightText: © Hypermode Inc. <hello@hypermode.com>
* SPDX-License-Identifier: Apache-2.0
*/
package badger
import (
"bytes"
"context"
"sort"
"sync"
"sync/atomic"
"time"
humanize "github.com/dustin/go-humanize"
"google.golang.org/protobuf/proto"
"github.com/dgraph-io/badger/v4/pb"
"github.com/dgraph-io/badger/v4/y"
"github.com/dgraph-io/ristretto/v2/z"
)
const batchSize = 16 << 20 // 16 MB
// maxStreamSize is the maximum allowed size of a stream batch. This is a soft limit
// as a single list that is still over the limit will have to be sent as is since it
// cannot be split further. This limit prevents the framework from creating batches
// so big that sending them causes issues (e.g running into the max size gRPC limit).
var maxStreamSize = uint64(100 << 20) // 100MB
// Stream provides a framework to concurrently iterate over a snapshot of Badger, pick up
// key-values, batch them up and call Send. Stream does concurrent iteration over many smaller key
// ranges. It does NOT send keys in lexicographical sorted order. To get keys in sorted
// order, use Iterator.
type Stream struct {
// Prefix to only iterate over certain range of keys. If set to nil (default), Stream would
// iterate over the entire DB.
Prefix []byte
// Number of goroutines to use for iterating over key ranges. Defaults to 8.
NumGo int
// Badger would produce log entries in Infof to indicate the progress of Stream. LogPrefix can
// be used to help differentiate them from other activities. Default is "Badger.Stream".
LogPrefix string
// ChooseKey is invoked each time a new key is encountered. Note that this is not called
// on every version of the value, only the first encountered version (i.e. the highest version
// of the value a key has). ChooseKey can be left nil to select all keys.
//
// Note: Calls to ChooseKey are concurrent.
ChooseKey func(item *Item) bool
// MaxSize is the maximum allowed size of a stream batch. This is a soft limit
// as a single list that is still over the limit will have to be sent as is since it
// cannot be split further. This limit prevents the framework from creating batches
// so big that sending them causes issues (e.g running into the max size gRPC limit).
// If necessary, set it up before the Stream starts synchronisation
// This is not a concurrency-safe setting
MaxSize uint64
// KeyToList, similar to ChooseKey, is only invoked on the highest version of the value. It
// is upto the caller to iterate over the versions and generate zero, one or more KVs. It
// is expected that the user would advance the iterator to go through the versions of the
// values. However, the user MUST immediately return from this function on the first encounter
// with a mismatching key. See example usage in ToList function. Can be left nil to use ToList
// function by default.
//
// KeyToList has access to z.Allocator accessible via stream.Allocator(itr.ThreadId). This
// allocator can be used to allocate KVs, to decrease the memory pressure on Go GC. Stream
// framework takes care of releasing those resources after calling Send. AllocRef does
// NOT need to be set in the returned KVList, as Stream framework would ignore that field,
// instead using the allocator assigned to that thread id.
//
// Note: Calls to KeyToList are concurrent.
KeyToList func(key []byte, itr *Iterator) (*pb.KVList, error)
// UseKeyToListWithThreadId is used to indicate that KeyToListWithThreadId should be used
// instead of KeyToList. This is a new api that can be used to figure out parallelism
// of the stream. Each threadId would be run serially. KeyToList being concurrent makes you
// take care of concurrency in KeyToList. Here threadId could be used to do some things serially.
// Once a thread finishes FinishThread() would be called.
UseKeyToListWithThreadId bool
KeyToListWithThreadId func(key []byte, itr *Iterator, threadId int) (*pb.KVList, error)
FinishThread func(threadId int) (*pb.KVList, error)
// This is the method where Stream sends the final output. All calls to Send are done by a
// single goroutine, i.e. logic within Send method can expect single threaded execution.
Send func(buf *z.Buffer) error
// Read data above the sinceTs. All keys with version =< sinceTs will be ignored.
SinceTs uint64
readTs uint64
db *DB
rangeCh chan keyRange
kvChan chan *z.Buffer
nextStreamId atomic.Uint32
doneMarkers bool
scanned atomic.Uint64 // used to estimate the ETA for data scan.
numProducers atomic.Int32
}
// SendDoneMarkers when true would send out done markers on the stream. False by default.
func (st *Stream) SendDoneMarkers(done bool) {
st.doneMarkers = done
}
// ToList is a default implementation of KeyToList. It picks up all valid versions of the key,
// skipping over deleted or expired keys.
func (st *Stream) ToList(key []byte, itr *Iterator) (*pb.KVList, error) {
a := itr.Alloc
ka := a.Copy(key)
list := &pb.KVList{}
for ; itr.Valid(); itr.Next() {
item := itr.Item()
if item.IsDeletedOrExpired() {
break
}
if !bytes.Equal(key, item.Key()) {
// Break out on the first encounter with another key.
break
}
kv := y.NewKV(a)
kv.Key = ka
if err := item.Value(func(val []byte) error {
kv.Value = a.Copy(val)
return nil
}); err != nil {
return nil, err
}
kv.Version = item.Version()
kv.ExpiresAt = item.ExpiresAt()
kv.UserMeta = a.Copy([]byte{item.UserMeta()})
list.Kv = append(list.Kv, kv)
if st.db.opt.NumVersionsToKeep == 1 {
break
}
if item.DiscardEarlierVersions() {
break
}
}
return list, nil
}
// keyRange is [start, end), including start, excluding end. Do ensure that the start,
// end byte slices are owned by keyRange struct.
func (st *Stream) produceRanges(ctx context.Context) {
ranges := st.db.Ranges(st.Prefix, st.NumGo)
y.AssertTrue(len(ranges) > 0)
y.AssertTrue(ranges[0].left == nil)
y.AssertTrue(ranges[len(ranges)-1].right == nil)
st.db.opt.Infof("Number of ranges found: %d\n", len(ranges))
// Sort in descending order of size.
sort.Slice(ranges, func(i, j int) bool {
return ranges[i].size > ranges[j].size
})
for i, r := range ranges {
st.rangeCh <- *r
st.db.opt.Infof("Sent range %d for iteration: [%x, %x) of size: %s\n",
i, r.left, r.right, humanize.IBytes(uint64(r.size)))
}
close(st.rangeCh)
}
// produceKVs picks up ranges from rangeCh, generates KV lists and sends them to kvChan.
func (st *Stream) produceKVs(ctx context.Context, threadId int) error {
st.numProducers.Add(1)
defer st.numProducers.Add(-1)
var txn *Txn
if st.readTs > 0 {
txn = st.db.NewTransactionAt(st.readTs, false)
} else {
txn = st.db.NewTransaction(false)
}
defer txn.Discard()
// produceKVs is running iterate serially. So, we can define the outList here.
outList := z.NewBuffer(2*batchSize, "Stream.ProduceKVs")
defer func() {
// The outList variable changes. So, we need to evaluate the variable in the defer. DO NOT
// call `defer outList.Release()`.
_ = outList.Release()
}()
iterate := func(kr keyRange) error {
iterOpts := DefaultIteratorOptions
iterOpts.AllVersions = true
iterOpts.Prefix = st.Prefix
iterOpts.PrefetchValues = true
iterOpts.SinceTs = st.SinceTs
itr := txn.NewIterator(iterOpts)
itr.ThreadId = threadId
defer itr.Close()
itr.Alloc = z.NewAllocator(1<<20, "Stream.Iterate")
defer itr.Alloc.Release()
// This unique stream id is used to identify all the keys from this iteration.
streamId := st.nextStreamId.Add(1)
var scanned int
sendIt := func() error {
select {
case st.kvChan <- outList:
outList = z.NewBuffer(2*batchSize, "Stream.ProduceKVs")
st.scanned.Add(uint64(itr.scanned - scanned))
scanned = itr.scanned
case <-ctx.Done():
return ctx.Err()
}
return nil
}
var prevKey []byte
for itr.Seek(kr.left); itr.Valid(); {
// it.Valid would only return true for keys with the provided Prefix in iterOpts.
item := itr.Item()
if bytes.Equal(item.Key(), prevKey) {
itr.Next()
continue
}
prevKey = append(prevKey[:0], item.Key()...)
// Check if we reached the end of the key range.
if len(kr.right) > 0 && bytes.Compare(item.Key(), kr.right) >= 0 {
break
}
// Check if we should pick this key.
if st.ChooseKey != nil && !st.ChooseKey(item) {
continue
}
// Now convert to key value.
itr.Alloc.Reset()
var list *pb.KVList
var err error
if st.UseKeyToListWithThreadId {
list, err = st.KeyToListWithThreadId(item.KeyCopy(nil), itr, threadId)
} else {
list, err = st.KeyToList(item.KeyCopy(nil), itr)
}
if err != nil {
st.db.opt.Warningf("While reading key: %x, got error: %v", item.Key(), err)
continue
}
if list == nil || len(list.Kv) == 0 {
continue
}
for _, kv := range list.Kv {
kv.StreamId = streamId
KVToBuffer(kv, outList)
if outList.LenNoPadding() < batchSize {
continue
}
if err := sendIt(); err != nil {
return err
}
}
}
if st.UseKeyToListWithThreadId {
if kvs, err := st.FinishThread(threadId); err != nil {
return err
} else {
for _, kv := range kvs.Kv {
kv.StreamId = streamId
KVToBuffer(kv, outList)
if outList.LenNoPadding() < batchSize {
continue
}
if err := sendIt(); err != nil {
return err
}
}
}
}
// Mark the stream as done.
if st.doneMarkers {
kv := &pb.KV{
StreamId: streamId,
StreamDone: true,
}
KVToBuffer(kv, outList)
}
return sendIt()
}
for {
select {
case kr, ok := <-st.rangeCh:
if !ok {
// Done with the keys.
return nil
}
if err := iterate(kr); err != nil {
return err
}
case <-ctx.Done():
return ctx.Err()
}
}
}
func (st *Stream) streamKVs(ctx context.Context) error {
onDiskSize, uncompressedSize := st.db.EstimateSize(st.Prefix)
// Manish has seen uncompressed size to be in 20% error margin.
uncompressedSize = uint64(float64(uncompressedSize) * 1.2)
st.db.opt.Infof("%s Streaming about %s of uncompressed data (%s on disk)\n",
st.LogPrefix, humanize.IBytes(uncompressedSize), humanize.IBytes(onDiskSize))
tickerDur := 5 * time.Second
var bytesSent uint64
t := time.NewTicker(tickerDur)
defer t.Stop()
now := time.Now()
sendBatch := func(batch *z.Buffer) error {
defer func() { _ = batch.Release() }()
sz := uint64(batch.LenNoPadding())
if sz == 0 {
return nil
}
bytesSent += sz
// st.db.opt.Infof("%s Sending batch of size: %s.\n", st.LogPrefix, humanize.IBytes(sz))
if err := st.Send(batch); err != nil {
st.db.opt.Warningf("Error while sending: %v\n", err)
return err
}
return nil
}
slurp := func(batch *z.Buffer) error {
loop:
for {
// Send the batch immediately if it already exceeds the maximum allowed size.
// If the size of the batch exceeds maxStreamSize, break from the loop to
// avoid creating a batch that is so big that certain limits are reached.
if uint64(batch.LenNoPadding()) > st.MaxSize {
break loop
}
select {
case kvs, ok := <-st.kvChan:
if !ok {
break loop
}
y.AssertTrue(kvs != nil)
y.Check2(batch.Write(kvs.Bytes()))
y.Check(kvs.Release())
default:
break loop
}
}
return sendBatch(batch)
} // end of slurp.
writeRate := y.NewRateMonitor(20)
scanRate := y.NewRateMonitor(20)
outer:
for {
var batch *z.Buffer
select {
case <-ctx.Done():
return ctx.Err()
case <-t.C:
// Instead of calculating speed over the entire lifetime, we average the speed over
// ticker duration.
writeRate.Capture(bytesSent)
scanned := st.scanned.Load()
scanRate.Capture(scanned)
numProducers := st.numProducers.Load()
st.db.opt.Infof("%s [%s] Scan (%d): ~%s/%s at %s/sec. Sent: %s at %s/sec."+
" jemalloc: %s\n",
st.LogPrefix, y.FixedDuration(time.Since(now)), numProducers,
y.IBytesToString(scanned, 1), humanize.IBytes(uncompressedSize),
humanize.IBytes(scanRate.Rate()),
y.IBytesToString(bytesSent, 1), humanize.IBytes(writeRate.Rate()),
humanize.IBytes(uint64(z.NumAllocBytes())))
case kvs, ok := <-st.kvChan:
if !ok {
break outer
}
y.AssertTrue(kvs != nil)
batch = kvs
// Otherwise, slurp more keys into this batch.
if err := slurp(batch); err != nil {
return err
}
}
}
st.db.opt.Infof("%s Sent data of size %s\n", st.LogPrefix, humanize.IBytes(bytesSent))
return nil
}
// Orchestrate runs Stream. It picks up ranges from the SSTables, then runs NumGo number of
// goroutines to iterate over these ranges and batch up KVs in lists. It concurrently runs a single
// goroutine to pick these lists, batch them up further and send to Output.Send. Orchestrate also
// spits logs out to Infof, using provided LogPrefix. Note that all calls to Output.Send
// are serial. In case any of these steps encounter an error, Orchestrate would stop execution and
// return that error. Orchestrate can be called multiple times, but in serial order.
func (st *Stream) Orchestrate(ctx context.Context) error {
ctx, cancel := context.WithCancel(ctx)
defer cancel()
st.rangeCh = make(chan keyRange, 3) // Contains keys for posting lists.
// kvChan should only have a small capacity to ensure that we don't buffer up too much data if
// sending is slow. Page size is set to 4MB, which is used to lazily cap the size of each
// KVList. To get 128MB buffer, we can set the channel size to 32.
st.kvChan = make(chan *z.Buffer, 32)
if st.KeyToList == nil {
st.KeyToList = st.ToList
}
// Picks up ranges from Badger, and sends them to rangeCh.
go st.produceRanges(ctx)
errCh := make(chan error, st.NumGo) // Stores error by consumeKeys.
var wg sync.WaitGroup
for i := 0; i < st.NumGo; i++ {
wg.Add(1)
go func(threadId int) {
defer wg.Done()
// Picks up ranges from rangeCh, generates KV lists, and sends them to kvChan.
if err := st.produceKVs(ctx, threadId); err != nil {
select {
case errCh <- err:
default:
}
}
}(i)
}
// Pick up key-values from kvChan and send to stream.
kvErr := make(chan error, 1)
go func() {
// Picks up KV lists from kvChan, and sends them to Output.
err := st.streamKVs(ctx)
if err != nil {
cancel() // Stop all the go routines.
}
kvErr <- err
}()
wg.Wait() // Wait for produceKVs to be over.
close(st.kvChan) // Now we can close kvChan.
defer func() {
// If due to some error, we have buffers left in kvChan, we should release them.
for buf := range st.kvChan {
_ = buf.Release()
}
}()
select {
case err := <-errCh: // Check error from produceKVs.
return err
default:
}
// Wait for key streaming to be over.
err := <-kvErr
return err
}
func (db *DB) newStream() *Stream {
return &Stream{
db: db,
NumGo: db.opt.NumGoroutines,
LogPrefix: "Badger.Stream",
MaxSize: maxStreamSize,
}
}
// NewStream creates a new Stream.
func (db *DB) NewStream() *Stream {
if db.opt.managedTxns {
panic("This API can not be called in managed mode.")
}
return db.newStream()
}
// NewStreamAt creates a new Stream at a particular timestamp. Should only be used with managed DB.
func (db *DB) NewStreamAt(readTs uint64) *Stream {
if !db.opt.managedTxns {
panic("This API can only be called in managed mode.")
}
stream := db.newStream()
stream.readTs = readTs
return stream
}
func BufferToKVList(buf *z.Buffer) (*pb.KVList, error) {
var list pb.KVList
err := buf.SliceIterate(func(s []byte) error {
kv := new(pb.KV)
if err := proto.Unmarshal(s, kv); err != nil {
return err
}
list.Kv = append(list.Kv, kv)
return nil
})
return &list, err
}
func KVToBuffer(kv *pb.KV, buf *z.Buffer) {
in := buf.SliceAllocate(proto.Size(kv))[:0]
_, err := proto.MarshalOptions{}.MarshalAppend(in, kv)
y.AssertTrue(err == nil)
}
|