1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155
|
<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN"
"http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
<html xmlns="http://www.w3.org/1999/xhtml">
<head>
<meta http-equiv="X-UA-Compatible" content="IE=Edge" />
<meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
<title>Description — BAGEL Manual</title>
<link rel="stylesheet" href="../_static/override.css" type="text/css" />
<link rel="stylesheet" href="../_static/pygments.css" type="text/css" />
<script type="text/javascript" id="documentation_options" data-url_root="../" src="../_static/documentation_options.js"></script>
<script type="text/javascript" src="../_static/jquery.js"></script>
<script type="text/javascript" src="../_static/underscore.js"></script>
<script type="text/javascript" src="../_static/doctools.js"></script>
<script type="text/javascript" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.1/MathJax.js?config=TeX-AMS-MML_HTMLorMML"></script>
<link rel="search" title="Search" href="../search.html" />
<link rel="next" title="Miscellaneous features" href="../miscellaneous/misc.html" />
<link rel="prev" title="ASD-DMRG" href="asd_dmrg.html" />
</head><body>
<div class="related" role="navigation" aria-label="related navigation">
<h3>Navigation</h3>
<ul>
<li class="right" style="margin-right: 10px">
<a href="../miscellaneous/misc.html" title="Miscellaneous features"
accesskey="N">next</a></li>
<li class="right" >
<a href="asd_dmrg.html" title="ASD-DMRG"
accesskey="P">previous</a> |</li>
<li class="nav-item nav-item-0"><a href="../index.html">BAGEL Manual</a> »</li>
<li class="nav-item nav-item-1"><a href="../user-manual.html" ><strong>BAGEL user manual</strong></a> »</li>
<li class="nav-item nav-item-2"><a href="asd.html" >Active space decomposition method</a> »</li>
<li class="nav-item nav-item-3"><a href="asd_dmrg.html" accesskey="U">ASD-DMRG</a> »</li>
</ul>
</div>
<div class="document">
<div class="documentwrapper">
<div class="bodywrapper">
<div class="body" role="main">
<div class="section" id="description">
<span id="multisite"></span><h1>Description<a class="headerlink" href="#description" title="Permalink to this headline">¶</a></h1>
<p>The constructor of molecular aggregate for ASD-DMRG algorithm.</p>
</div>
<div class="section" id="keywords">
<h1>Keywords<a class="headerlink" href="#keywords" title="Permalink to this headline">¶</a></h1>
<div class="topic">
<p class="topic-title first"><code class="docutils literal notranslate"><span class="pre">multisite</span></code></p>
<div class="line-block">
<div class="line"><strong>Description:</strong> start construting multisite</div>
</div>
</div>
<div class="topic">
<p class="topic-title first"><code class="docutils literal notranslate"><span class="pre">refs</span></code></p>
<div class="line-block">
<div class="line"><strong>Description:</strong> provide saved reference names</div>
<div class="line"><strong>Recommendation:</strong> refer to sample input for details</div>
</div>
</div>
<div class="topic">
<p class="topic-title first"><code class="docutils literal notranslate"><span class="pre">active</span></code></p>
<div class="line-block">
<div class="line"><strong>Description:</strong> specify single site active orbitals</div>
<div class="line"><strong>Datatype:</strong> set<int></div>
</div>
</div>
<div class="topic">
<p class="topic-title first"><code class="docutils literal notranslate"><span class="pre">hf</span></code></p>
<div class="line-block">
<div class="line"><strong>Description:</strong> multisite restricted Hartree-Fock calculation options</div>
<div class="line"><strong>Default:</strong> use the same options as single site <a class="reference internal" href="../scf/hf.html#hf"><span class="std std-ref">Hartree–Fock</span></a> calculations</div>
</div>
</div>
<div class="topic">
<p class="topic-title first"><code class="docutils literal notranslate"><span class="pre">localization</span></code></p>
<div class="line-block">
<div class="line"><strong>Description:</strong> localize multisite molecular orbitals</div>
<div class="line"><strong>Default:</strong> use default <a class="reference internal" href="../miscellaneous/localization.html#localization"><span class="std std-ref">Orbital localization</span></a></div>
</div>
</div>
</div>
<div class="section" id="prerequisite">
<h1>Prerequisite<a class="headerlink" href="#prerequisite" title="Permalink to this headline">¶</a></h1>
<p><a class="reference internal" href="../scf/hf.html#hf"><span class="std std-ref">Hartree–Fock</span></a> calculations are needed to obtain fragment orbitals.</p>
</div>
</div>
</div>
</div>
<div class="sphinxsidebar" role="navigation" aria-label="main navigation">
<div class="sphinxsidebarwrapper">
<h3><a href="../index.html">Table Of Contents</a></h3>
<ul class="current">
<li class="toctree-l1 current"><a class="reference internal" href="../user-manual.html"><strong>BAGEL user manual</strong></a><ul class="current">
<li class="toctree-l2"><a class="reference internal" href="../quickstart/quickstart.html">First steps with BAGEL</a></li>
<li class="toctree-l2"><a class="reference internal" href="../molecule/molecule-toc.html">Molecule specification</a></li>
<li class="toctree-l2"><a class="reference internal" href="../scf/scf.html">Self-consistent field</a></li>
<li class="toctree-l2"><a class="reference internal" href="../ci/ci_methods.html">Configuration interaction</a></li>
<li class="toctree-l2"><a class="reference internal" href="../multi/multi.html">Multiconfiguration self-consistent field</a></li>
<li class="toctree-l2"><a class="reference internal" href="../pt2/pt2.html">Perturbation theory</a></li>
<li class="toctree-l2"><a class="reference internal" href="../smith/smith.html">SMITH3-generated code</a></li>
<li class="toctree-l2"><a class="reference internal" href="../grad/grad.html">Nuclear gradients and related functionalities</a></li>
<li class="toctree-l2 current"><a class="reference internal" href="asd.html">Active space decomposition method</a></li>
<li class="toctree-l2"><a class="reference internal" href="../miscellaneous/misc.html">Miscellaneous features</a></li>
<li class="toctree-l2"><a class="reference internal" href="../supp_info/supp_info.html">Supplementary information</a></li>
<li class="toctree-l2"><a class="reference internal" href="../author.html">Author contributions</a></li>
<li class="toctree-l2"><a class="reference internal" href="../funding.html">Funding and citation</a></li>
</ul>
</li>
</ul>
<h4>Previous topic</h4>
<p class="topless"><a href="asd_dmrg.html"
title="previous chapter">ASD-DMRG</a></p>
<h4>Next topic</h4>
<p class="topless"><a href="../miscellaneous/misc.html"
title="next chapter">Miscellaneous features</a></p>
<div id="searchbox" style="display: none" role="search">
<h3>Quick search</h3>
<div class="searchformwrapper">
<form class="search" action="../search.html" method="get">
<input type="text" name="q" />
<input type="submit" value="Go" />
<input type="hidden" name="check_keywords" value="yes" />
<input type="hidden" name="area" value="default" />
</form>
</div>
</div>
<script type="text/javascript">$('#searchbox').show(0);</script>
</div>
</div>
<div class="clearer"></div>
</div>
<div class="related" role="navigation" aria-label="related navigation">
<h3>Navigation</h3>
<ul>
<li class="right" style="margin-right: 10px">
<a href="../miscellaneous/misc.html" title="Miscellaneous features"
>next</a></li>
<li class="right" >
<a href="asd_dmrg.html" title="ASD-DMRG"
>previous</a> |</li>
<li class="nav-item nav-item-0"><a href="../index.html">BAGEL Manual</a> »</li>
<li class="nav-item nav-item-1"><a href="../user-manual.html" ><strong>BAGEL user manual</strong></a> »</li>
<li class="nav-item nav-item-2"><a href="asd.html" >Active space decomposition method</a> »</li>
<li class="nav-item nav-item-3"><a href="asd_dmrg.html" >ASD-DMRG</a> »</li>
</ul>
</div>
<div class="footer" role="contentinfo">
© Copyright 2017, Shiozaki Group.
</div>
</body>
</html>
|