File: SER.db

package info (click to toggle)
ball 1.4.3~beta1-3
  • links: PTS, VCS
  • area: main
  • in suites: stretch
  • size: 318,984 kB
  • sloc: cpp: 346,579; ansic: 4,097; python: 2,664; yacc: 1,778; lex: 1,099; xml: 964; sh: 688; sql: 316; awk: 118; makefile: 108
file content (84 lines) | stat: -rw-r--r-- 2,417 bytes parent folder | download | duplicates (8)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
<node>SER
	<node>Names
		<node>Serine</node>
		<node>Serin</node>
		<node>Ser</node>
		<node>S</node>
	</node>
	<node>Atoms
		<node>N<value>N 0.1130663 1.226434 -0.1468897</value></node>
		<node>3H<value>H 0.8968111 1.837972 0.05464922</value></node>
		<node>CA<value>C -0.7048293 1.905604 -1.168307</value></node>
		<node>HA<value>H -0.2017423 1.780946 -2.128185</value></node>
		<node>C<value>C -0.7701361 3.410257 -0.8778276</value></node>
		<node>O<value>O 0.1488766 3.858471 -0.1539113</value></node>
		<node>CB<value>C -2.088618 1.24965 -1.250489</value></node>
		<node>1HB<value>H -1.956628 0.1725609 -1.368818</value></node>
		<node>2HB<value>H -2.637483 1.435655 -0.3253672</value></node>
		<node>OG<value>O -2.817839 1.744102 -2.356831</value></node>
		<node>HG<value>H -3.648096 1.264079 -2.429246</value></node>
		<node>OXT<value>O -1.487331 4.10633 -1.629405</value></node>
		<node>1H<value>H -0.4311985 1.10388 0.6950446</value></node>
		<node>2H<value>H 0.4303224 0.3296314 -0.4862972</value></node>
	</node>
	<node>Bonds
		<node>5<value>3H N s</value></node>
		<node>6<value>CA N s</value></node>
		<node>10<value>HA CA s</value></node>
		<node>11<value>C CA s</value></node>
		<node>14<value>O C d</value></node>
		<node>15<value>CB CA s</value></node>
		<node>19<value>1HB CB s</value></node>
		<node>20<value>2HB CB s</value></node>
		<node>21<value>OG CB s</value></node>
		<node>23<value>HG OG s</value></node>
		<node>24<value>OXT C s</value></node>
		<node>25<value>1H N s</value></node>
		<node>26<value>2H N s</value></node>
	</node>
	<node>Connections
		<node>N-term<value>N C-term s 1.33 0.5</value></node>
		<node>C-term<value>C N-term s 1.33 0.5</value></node>
	</node>
	<node>Properties
		<node>AMINO_ACID</node>
	</node>
	<node>Variants
		<node>Default
			<node>Delete
				<node>OXT</node>
				<node>1H</node>
				<node>2H</node>
			</node>
			<node>Rename
				<node>3H<value>H</value></node>
			</node>
		</node>
		<node>SER-M
			<node>Properties
				<node>N_TERMINAL</node>
				<node>C_TERMINAL</node>
			</node>
		</node>
		<node>SER-N
			<node>Delete
				<node>OXT</node>
			</node>
			<node>Properties
				<node>N_TERMINAL</node>
			</node>
		</node>
		<node>SER-C
			<node>Delete
				<node>1H</node>
				<node>2H</node>
			</node>
			<node>Rename
				<node>3H<value>H</value></node>
			</node>
			<node>Properties
				<node>C_TERMINAL</node>
			</node>
		</node>
	</node>
</node>