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// -*- Mode: C++; tab-width: 2; -*-
// vi: set ts=2:
//
#include <BALL/CONCEPT/classTest.h>
///////////////////////////
#include <BALL/STRUCTURE/peptideCapProcessor.h>
#include <BALL/STRUCTURE/peptideBuilder.h>
#include <BALL/STRUCTURE/fragmentDB.h>
#include <vector>
///////////////////////////
START_TEST(PeptideCapProcessor)
/////////////////////////////////////////////////////////////
/////////////////////////////////////////////////////////////
using namespace BALL;
using namespace BALL::Peptides;
PeptideCapProcessor* pcp = 0;
CHECK(PeptideCapProcessor())
pcp = new PeptideCapProcessor;
TEST_NOT_EQUAL(pcp, 0)
RESULT
CHECK(~PeptideCapProcessor())
delete pcp;
pcp = 0;
RESULT
CHECK(operator() (Composite& composite))
PeptideBuilder pb("ARNDHPKLR");
FragmentDB db("");
pb.setFragmentDB(&db);
Protein* prot = pb.construct();
TEST_EQUAL(prot->countResidues(), 9)
PeptideCapProcessor pepcpro;
prot->apply(pepcpro);
TEST_EQUAL(prot->countResidues(), 11)
TEST_EQUAL(prot->getResidue(0)->getName() , "ACE")
TEST_EQUAL(prot->getResidue(10)->getName() , "NME")
TEST_EQUAL(prot->countAtoms(), 169)
// apply twice
prot->apply(pepcpro);
TEST_EQUAL(prot->countResidues(), 11)
TEST_EQUAL(prot->countAtoms(), 169)
delete prot;
RESULT
CHECK(operator() - single Residue)
PeptideBuilder pb("A");
FragmentDB db("");
pb.setFragmentDB(&db);
Protein* prot = pb.construct();
PeptideCapProcessor pepcpro;
prot->apply(pepcpro);
TEST_EQUAL(prot->countResidues(), 3)
TEST_EQUAL(prot->getResidue(0)->getName() , "ACE")
TEST_EQUAL(prot->getResidue(2)->getName() , "NME")
TEST_EQUAL(prot->countAtoms(), 22)
delete prot;
RESULT
////////////////////////////////////////////////////////////
/////////////////////////////////////////////////////////////
END_TEST
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