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class SecondaryStructure
: AtomContainer
{
%TypeHeaderCode
#include <BALL/KERNEL/secondaryStructure.h>
%End
public:
enum Type
{
HELIX,
COIL,
STRAND,
TURN,
UNKNOWN,
NUMBER_OF_TYPES
};
SecondaryStructure();
SecondaryStructure(const SecondaryStructure&,bool = true);
SecondaryStructure(const String&);
~SecondaryStructure() throw();
virtual void clear() throw();
virtual void destroy() throw();
void set(const SecondaryStructure&, bool = true);
void get(SecondaryStructure&, bool = true) const;
void swap(SecondaryStructure&);
Type getType() const throw();
void setType(Type) throw();
Protein* getProtein();
Chain* getChain();
Residue* getResidue(int);
Residue* getNTerminal();
Residue* getCTerminal();
PDBAtom* getPDBAtom(int);
int countResidues() const;
int countPDBAtoms() const;
void prepend(Residue& /Transfer/);
void append(Residue& /Transfer/);
void insert(Residue& /Transfer/);
void insertBefore(Residue& /Transfer/, Composite&);
void insertAfter(Residue& /Transfer/, Composite&);
bool remove(Residue&);
void spliceBefore(SecondaryStructure&);
void spliceAfter(SecondaryStructure&);
void splice(SecondaryStructure&);
virtual bool isValid() const throw();
SIP_PYOBJECT __str__();
%MethodCode
return PyString_FromString(String(String("SecondaryStructure ") + sipCpp->getName()
+ " { " + String(sipCpp->countResidues()) + " residues }").c_str());
%End
SIP_PYOBJECT __repr__();
%MethodCode
return PyString_FromString(String(String("SecondaryStructure ") + sipCpp->getName()
+ " { " + String(sipCpp->countResidues()) + " residues }").c_str());
%End
};
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