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%{
#include <BALL/STRUCTURE/smilesParser.h>
#include <BALL/COMMON/parserDefinitions.h>
using namespace BALL;
#include "smilesParserParser.h"
#include <string.h>
%}
%option nounput
%option noyywrap
%%
[0-9] {
SmilesParser::state.current_parser->state.char_count++;
SmilesParserlval.number = yytext[0] - '0';
return TK_DIGIT;
}
He|Li|Be|Ne|Na|Mg|Al|Si|Ar|K|Ca|Sc|Ti|V|Cr|Mn|Fe|Co|Ni|Cu|Zn|Ga|Ge|As|Se|Kr|Rb|Sr|Y|Zr|Nb|Mo|Tc|Ru|Rh|Pd|Ag|Cd|In|Sn|Sb|Te|Xe|Cs|Ba|Lu|Hf|Ta|W|Re|Os|Ir|Pt|Au|Hg|Tl|Pb|Bi|Po|At|Rn|Fr|Ra|Lr|Rf|Db|Sg|Bh|Hs|Mt|Uun|Uuu|Uub|Uut|Uuq|Uup|Uuh|Uus|Uuo|La|Ce|Pr|Nd|Pm|Sm|Eu|Gd|Tb|Dy|Ho|Er|Tm|Yb|Ac|Th|Pa|U|Np|Pu|Am|Cm|Bk|Cf|Es|Fm|Md|No {
SmilesParser::state.current_parser->state.char_count += strlen(yytext);
SmilesParserlval.text = yytext;
return TK_ATOM;
}
b|c|n|o|p|s|f|i|br|cl {
SmilesParser::state.current_parser->state.char_count += strlen(yytext);
SmilesParserlval.text = yytext;
return TK_ORG_SUBSET_ATOM;
}
B|C|N|O|P|S|F|I|Br|Cl {
SmilesParser::state.current_parser->state.char_count += strlen(yytext);
SmilesParserlval.text = yytext;
return TK_ORG_SUBSET_ATOM;
}
@TH {
SmilesParser::state.current_parser->state.char_count += 2;
return TK_CHIRAL_CLASS_TH;
}
@AL {
SmilesParser::state.current_parser->state.char_count += 2;
return TK_CHIRAL_CLASS_AL;
}
@SP {
SmilesParser::state.current_parser->state.char_count += 2;
return TK_CHIRAL_CLASS_SP;
}
@TB {
SmilesParser::state.current_parser->state.char_count += 2;
return TK_CHIRAL_CLASS_TB;
}
@OH {
SmilesParser::state.current_parser->state.char_count += 2;
return TK_CHIRAL_CLASS_OH;
}
H {
SmilesParser::state.current_parser->state.char_count++;
return TK_HYDROGEN;
}
-|=|\+|#|:|\.|@|\[|\]|\/|\\|\(|\) {
SmilesParser::state.current_parser->state.char_count++;
return yytext[0];
}
. {
SmilesParser::state.current_parser->state.char_count++;
throw Exception::ParseError
(__FILE__, __LINE__,
String("unknown symbol '") + yytext[0] + "' at position " + String(SmilesParser::state.current_parser->state.char_count), "");
}
%%
YY_BUFFER_STATE SmilesParser_buffer;
void SmilesParser_initBuffer(const char* buf)
{
SmilesParser_buffer = SmilesParser_scan_string(buf);
}
void SmilesParser_delBuffer()
{
SmilesParser_delete_buffer(SmilesParser_buffer);
}
void SmilesParser_destroy()
{
#ifdef BALL_HAS_YYLEX_DESTROY
SmilesParserlex_destroy();
#endif
}
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