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/* Copyright 2018. Martin Uecker.
* All rights reserved. Use of this source code is governed by
* a BSD-style license which can be found in the LICENSE file.
*
* Authors:
* 2016 Martin Uecker <martin.uecker@med.uni-goettingen.de>
*/
#include <math.h>
#include "num/ode.h"
#include "simu/bloch.h"
#include "utest.h"
#if 0
static void lorenz(float out[3], const float in[3], float sigma, float rho, float beta)
{
out[0] = sigma * (in[1] - in[0]);
out[1] = in[0] * (rho - in[2]) - in[1];
out[2] = in[0] * in[1] - beta * in[2];
}
static void lorenz_fun(void* data, float* out, float t, const float* in)
{
(void)data; (void)t;
lorenz(out, in, 10., 28., 8. / 3.);
}
#endif
struct bloch_s {
float r1;
float r2;
float gb[3];
};
static void bloch_fun(void* _data, float* out, float t, const float* in)
{
struct bloch_s* data = _data;
(void)t;
bloch_ode(out, in, data->r1, data->r2, data->gb);
}
static void bloch_pdy2(void* _data, float* out, float t, const float* in)
{
struct bloch_s* data = _data;
(void)t;
bloch_pdy((float(*)[3])out, in, data->r1, data->r2, data->gb);
}
static void bloch_pdp2(void* _data, float* out, float t, const float* in)
{
struct bloch_s* data = _data;
(void)t;
bloch_pdp((float(*)[3])out, in, data->r1, data->r2, data->gb);
}
static bool test_ode_bloch(void)
{
struct bloch_s data = { 1. / WATER_T1, 1. / WATER_T2, { 0., 0., GAMMA_H1 * SKYRA_GRADIENT * 0.0001 } };
float x[3] = { 1., 0., 0. };
float x0[3] = { 1., 0., 0. };
float x2[3];
float h = 0.1;
float tol = 0.000001;
float end = 0.2;
ode_interval(h, tol, 3, x, 0., end, &data, bloch_fun);
bloch_relaxation(x2, end, x0, data.r1, data.r2, data.gb);
float err2 = 0.;
for (int i = 0; i < 3; i++)
err2 += powf(x[i] - x2[i], 2.);
#if __GNUC__ >= 10
return (err2 < 1.E-6);
#else
return (err2 < 1.E-7);
#endif
}
// UXT_REGISTER_TEST(test_ode_bloch);
static bool test_bloch_matrix(void)
{
struct bloch_s data = { 1. / WATER_T1, 1. / WATER_T2, { 0., 0., GAMMA_H1 * SKYRA_GRADIENT * 0.0001 } };
float m[4][4];
bloch_matrix_ode(m, data.r1, data.r2, data.gb);
float m0[4] = { 0.1, 0.2, 0.3, 1. };
float out[3];
bloch_ode(out, m0, data.r1, data.r2, data.gb);
float out2[4];
for (unsigned int i = 0; i < 4; i++) {
out2[i] = 0.;
for (unsigned int j = 0; j < 4; j++)
out2[i] += m[i][j] * m0[j];
}
return (0. == out[0] - out2[0])
&& (0. == out[1] - out2[1])
&& (0. == out[2] - out2[2])
&& (0. == out2[3]);
}
// UXT_REGISTER_TEST(test_bloch_matrix);
static bool test_ode_matrix_bloch(void)
{
struct bloch_s data = { 1. / WATER_T1, 1. / WATER_T2, { 0., 0., GAMMA_H1 * SKYRA_GRADIENT * 0.0001 } };
float x[4] = { 1., 0., 0., 1. };
float x0[3] = { 1., 0., 0. };
float x2[3];
float h = 0.1;
float tol = 0.000001;
float end = 0.2;
float m[4][4];
bloch_matrix_ode(m, data.r1, data.r2, data.gb);
ode_matrix_interval(h, tol, 4, x, 0., end, m);
bloch_relaxation(x2, end, x0, data.r1, data.r2, data.gb);
float err2 = 0.;
for (int i = 0; i < 3; i++)
err2 += powf(x[i] - x2[i], 2.);
return (err2 < 1.E-6);
}
// UXT_REGISTER_TEST(test_ode_matrix_bloch);
struct sa_data_s {
int N;
float* r;
};
static void sa_fun(void* _data, float* out, float t)
{
struct sa_data_s* data = _data;
for (int i = 0; i < data->N; i++)
out[i] = expf(data->r[i] * t);
}
static void sa_der(void* _data, float* out, float t, const float* in)
{
struct sa_data_s* data = _data;
(void)t;
for (int i = 0; i < data->N; i++)
out[i] = data->r[i] * in[i];
}
static void sa_pdy(void* _data, float* out, float t, const float* in)
{
struct sa_data_s* data = _data;
(void)t; (void)in;
for (int i = 0; i < data->N; i++)
for (int j = 0; j < data->N; j++)
out[i * data->N + j] = (i == j) ? data->r[i] : 0.;
}
static void sa_pdp(void* _data, float* out, float t, const float* in)
{
struct sa_data_s* data = _data;
(void)t;
for (int i = 0; i < data->N; i++)
for (int j = 0; j < data->N; j++)
out[i * data->N + j] = (i == j) ? in[i] : 0.;
}
static bool test_ode_sa(void)
{
float h = 0.1;
float tol = 0.000001;
float end = 0.2;
struct sa_data_s data = { 1, (float[1]){ -WATER_T2 } };
float xp[2][1] = { { 1. }, { 0. } };
ode_direct_sa(h, tol, 1, 1, xp, 0., end, &data, sa_der, sa_pdy, sa_pdp);
float x[1] = { 1. };
sa_fun(&data, x, end);
if (fabsf(x[0] - xp[0][0]) > 1.E-30)
return false;
float y[1];
float q = 0.0001;
data.r[0] += q;
sa_fun(&data, y, end);
float df = y[0] - x[0];
float err = fabsf(df - xp[1][0] * q);
return err < 1.E-9;
}
// UXT_REGISTER_TEST(test_ode_sa);
static bool test_ode_sa2(void)
{
float h = 0.1;
float tol = 0.000001;
float end = 0.2;
int N = 10;
float r[N];
for (int i = 0; i < N; i++)
r[i] = -WATER_T2 / (1 + i);
struct sa_data_s data = { N, r };
float xp[N + 1][N];
for (int i = 0; i < N; i++) {
xp[0][i] = 1.;
for (int j = 0; j < N; j++)
xp[1 + j][i] = 0;
}
ode_direct_sa(h, tol, N, N, xp, 0., end, &data, sa_der, sa_pdy, sa_pdp);
float x[N];
sa_fun(&data, x, end);
for (int i = 0; i < N; i++) {
float err = fabsf(x[i] - xp[0][i]);
if (err > 1.E-6)
return false;
}
float y[N];
float q = 0.0001;
for (int j = 0; j < N; j++) {
data.r[j] += q;
sa_fun(&data, y, end);
data.r[j] -= q;
for (int i = 0; i < N; i++) {
float df = y[i] - x[i];
float sa = xp[1 + j][i] * q;
float err = fabsf(df - sa);
// printf("%d %d-%e-%e-%e\n", j, i, err, df, sa);
if (err > 1.E-7)
return false;
}
}
return true;
}
// UXT_REGISTER_TEST(test_ode_sa2);
static bool test_ode_sa_bloch(void)
{
struct bloch_s data = { 1. / WATER_T1, 1. / WATER_T2, { 0., 0., GAMMA_H1 * SKYRA_GRADIENT * 0.0001 } };
float xp[3][3] = { { 1., 0., 0. }, { 0. }, { 0. } };
float x0[3] = { 1., 0., 0. };
float x2[3];
float x2r1[3];
float x2r2[3];
float h = 0.1;
float tol = 0.000001;
float end = 0.2;
float q = 1.E-3;
ode_direct_sa(h, tol, 3, 2, xp, 0., end, &data, bloch_fun, bloch_pdy2, bloch_pdp2);
bloch_relaxation(x2, end, x0, data.r1, data.r2, data.gb);
bloch_relaxation(x2r1, end, x0, data.r1 + q, data.r2, data.gb);
bloch_relaxation(x2r2, end, x0, data.r1, data.r2 + q, data.gb);
float err2 = 0.;
for (int i = 0; i < 3; i++)
err2 += powf(xp[0][i] - x2[i], 2.);
#ifdef __clang__
if (err2 > 1.E-6)
#else
if (err2 > 1.E-7)
#endif
return false;
for (int i = 0; i < 3; i++)
err2 += powf(xp[0][i] - x2[i], 2.);
for (int i = 0; i < 3; i++) {
float err = fabsf(q * xp[1][i] - (x2r1[i] - x2[i]));
if (err > 1.E-7)
return false;
}
for (int i = 0; i < 3; i++) {
float err = fabsf(q * xp[2][i] - (x2r2[i] - x2[i]));
if (err > 1.E-7)
return false;
}
return true;
}
// UXT_REGISTER_TEST(test_ode_sa_bloch);
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