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bbmap 39.01%2Bdfsg-2
  • links: PTS, VCS
  • area: main
  • in suites: bookworm
  • size: 21,760 kB
  • sloc: java: 267,418; sh: 15,163; python: 5,247; ansic: 2,074; perl: 96; xml: 38; makefile: 38

Folder: driver

d .. (parent)
- - rwxr-xr-x 246 BBVersion.java
- - rwxr-xr-x 1,291 ClearRam.java
- - rwxr-xr-x 1,400 CollateSpikeIn.java
- - rwxr-xr-x 1,387 CompareReferenceGenomes.java
- - rwxr-xr-x 1,535 CompareSequences.java
- - rwxr-xr-x 2,226 ConcatenateFiles.java
- - rwxr-xr-x 4,961 ConcatenateTextFiles.java
- - rwxr-xr-x 1,304 Concatenator.java
- - rwxr-xr-x 1,748 ConvertSamToAln.java
- - rwxr-xr-x 4,934 CorrelateIdentity.java
- - rwxr-xr-x 713 CountRNAs.java
- - rwxr-xr-x 6,570 CountSharedLines.java
- - rwxr-xr-x 4,322 EstherFilter.java
- - rwxr-xr-x 5,229 FilterAssemblySummary.java
- - rwxr-xr-x 7,273 FilterLines.java
- - rwxr-xr-x 14,105 FilterReadsByName.java
- - rwxr-xr-x 12,296 FindMotifs.java
- - rwxr-xr-x 668 FixChr.java
- - rwxr-xr-x 1,513 FixDumbFile.java
- - rwxr-xr-x 11,258 GenerateNoCallsFromCoverage.java
- - rwxr-xr-x 2,991 GetSequence.java
- - rwxr-xr-x 841 GetUniquePrefixes.java
- - rwxr-xr-x 323 Grep.java
- - rwxr-xr-x 9,453 Life.java
- - rwxr-xr-x 292 LineCount.java
- - rwxr-xr-x 16,104 LoadReads.java
- - rwxr-xr-x 1,032 LookAtID.java
- - rwxr-xr-x 11,792 MakeTestScript.java
- - rwxr-xr-x 6,830 MakeTestScriptScoreOnly.java
- - rwxr-xr-x 6,734 MeasureGene.java
- - rwxr-xr-x 5,989 MergeBigelow.java
- - rwxr-xr-x 1,576 MergeCoverageOTU.java
- - rwxr-xr-x 2,450 MergeTextFiles.java
- - rwxr-xr-x 2,451 MergeTextFiles2.java
- - rwxr-xr-x 2,082 MoveFiles.java
- - rwxr-xr-x 5,113 ParseCrossblockResults.java
- - rwxr-xr-x 7,664 PlotGC.java
- - rwxr-xr-x 871 PrintEnv.java
- - rwxr-xr-x 1,747 ProcessFragMerging.java
- - rwxr-xr-x 1,978 ProcessSpeed.java
- - rwxr-xr-x 1,254 ProcessSpeed2.java
- - rwxr-xr-x 8,856 ProcessWebcheck.java
- - rwxr-xr-x 9,515 ReduceSilva.java
- - rwxr-xr-x 16,417 RenameAndMux.java
- - rwxr-xr-x 2,891 RenameByHeader.java
- - rwxr-xr-x 4,411 RenameNcbiToTid.java
- - rwxr-xr-x 520 RenameRefseqFiles.java
- - rwxr-xr-x 1,787 Sample.java
- - rwxr-xr-x 4,679 Search.java
- - rwxr-xr-x 2,032 SelectReads.java
- - rwxr-xr-x 7,267 SniffSplices.java
- - rwxr-xr-x 8,455 SummarizeContamReport.java
- - rwxr-xr-x 2,817 SummarizeCoverage.java
- - rwxr-xr-x 4,407 SummarizeCrossblock.java
- - rwxr-xr-x 3,141 SummarizeMSDIN.java
- - rwxr-xr-x 6,701 SummarizeQuast.java
- - rwxr-xr-x 6,726 SummarizeSealStats.java
- - rwxr-xr-x 1,822 TestCompressionSpeed.java
- - rwxr-xr-x 4,396 TestLockSpeed.java
- - rwxr-xr-x 5,338 Translator.java
- - rwxr-xr-x 1,765 Translator2.java
- - rwxr-xr-x 1,091 TransposeTextFile.java
- - rwxr-xr-x 1,613 TrimSamFile.java