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package tax;
import java.io.IOException;
import java.io.InputStream;
import java.net.MalformedURLException;
import java.net.URL;
import java.util.Arrays;
import java.util.Locale;
import shared.Shared;
import shared.Timer;
public class Query {
/** For testing throughput */
public static void main(String[] args){
// sun.net.http.errorstream.enableBuffering=true;
// System.setProperty("sun.net.http.errorstream.enableBuffering", "true");
// System.setProperty("http.errorstream.enableBuffering", "true");
////// System.setProperty("", "");
// System.setProperty("http.keepAlive", "true");
// System.setProperty("http.maxConnections", "50");
//// System.setProperty("", "");
//// System.setProperty("", "");
//
// System.out.println("sun.net.http.errorstream.enableBuffering="+System.getProperty("sun.net.http.errorstream.enableBuffering"));
// System.out.println("sun.net.http.errorstream.timeout="+System.getProperty("sun.net.http.errorstream.timeout"));
// System.out.println("sun.net.http.errorstream.bufferSize="+System.getProperty("sun.net.http.errorstream.bufferSize"));
// System.out.println("http.keepAlive="+System.getProperty("http.keepAlive"));
// System.out.println("http.maxConnections="+System.getProperty("http.maxConnections"));
// System.out.println(System.getProperties());
// System.out.println("="+System.getProperty(""));
// System.out.println("="+System.getProperty(""));
// System.out.println("="+System.getProperty(""));
String x=args[0];
int requests=(args.length>1 ? Integer.parseInt(args[1]) : 1);
Timer t=new Timer();
Timer t2=new Timer();
Timer t3=new Timer();
// URL url=toUrl(x);
for(int i=0; i<requests; i++){
String s=request(x);
// System.out.println(s);
if(i==0){t3.start();}
//t2.stop("");
//t2.start();
}
t3.stop();
t.stop("Time: \t");
double qps=requests*1000000000.0/(t.elapsed);
System.err.println(String.format(Locale.ROOT, "Qps: \t%.2f", qps));
System.err.println("Time2: \t"+t3);
double qps2=(requests-1)*1000000000.0/(t3.elapsed);
System.err.println(String.format(Locale.ROOT, "Qps2: \t%.2f", qps2));
// System.out.println(s);
// BufferedReader reader;
// try {
// reader = new BufferedReader(new InputStreamReader(url.openStream(), "UTF-8"));
//
// for (String line; (line = reader.readLine()) != null;) {
// System.out.println(line);
// }
//
// } catch (UnsupportedEncodingException e) {
// // TODO Auto-generated catch block
// e.printStackTrace();
// } catch (IOException e) {
// // TODO Auto-generated catch block
// e.printStackTrace();
// }
}
public static int[] getGi(String...args){
return get("pt_gi", args);
}
public static int[] getAccession(String...args){
return get("pt_accession", args);
}
public static int[] get(String type, String...args){
String host=Shared.taxServer();
StringBuilder sb=new StringBuilder(host.length()+32);
sb.append(host);
sb.append(type);
sb.append('\t');
String comma="";
for(String arg : args){
sb.append(comma);
sb.append(arg);
comma=",";
}
String result=request(sb.toString());
String[] split=result.split(",");
int[] ret=new int[split.length];
for(int i=0; i<split.length; i++){
ret[i]=Integer.parseInt(split[i]);
}
return ret;
}
public static String request(String x){
InputStream is=toStream(x);
if(is==null){return null;}
try {
byte[] buffer=new byte[256];
int count=is.read(buffer);
int next=0;
while(count>-1){
next+=count;
if(next>=buffer.length){
buffer=Arrays.copyOf(buffer, buffer.length*2);
}
count=is.read(buffer, next, buffer.length-next);
}
is.close(); //TODO: Why am I not closing this stream?
return new String(buffer, 0, next);
} catch (IOException e) {
// TODO Auto-generated catch block
e.printStackTrace();
}
try {
is.close();
} catch (IOException e) {
// TODO Auto-generated catch block
e.printStackTrace();
}
return null;
}
public static InputStream toStream(String x){
URL url=null;
try {
url = new URL(x);
} catch (MalformedURLException e1) {
// TODO Auto-generated catch block
e1.printStackTrace();
return null;
}
try {
InputStream is=url.openStream();
return is;
} catch (IOException e) {
// TODO Auto-generated catch block
e.printStackTrace();
}
return null;
}
// public static URL toUrl(String x){
// URL url=null;
// try {
// url = new URL(x);
// } catch (MalformedURLException e1) {
// // TODO Auto-generated catch block
// e1.printStackTrace();
// }
//
// return url;
// }
//
// public static URLConnection toUrlConnection(URL url, String x){
// URLConnection urlc=null;
//
// try {
// urlc = url.openConnection();
// } catch (IOException e) {
// // TODO Auto-generated catch block
// e.printStackTrace();
// }
// return urlc;
// }
}
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