File: fetchMito.sh

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#Fetches mitochondrial genomes and annotations from NCBI.

wget -q -O - ftp://ftp.ncbi.nih.gov/genomes/refseq/mitochondrion/*genomic.gbff.gz > mito.genomic.gbff.gz
wget -q -O - ftp://ftp.ncbi.nih.gov/genomes/refseq/mitochondrion/*genomic.fna.gz > mito.genomic.fna.gz
gbff2gff.sh mito.genomic.gbff.gz mito.genomic.gff.gz