package info
(click to toggle)
Folder: 39.20+dfsg-3
| .. (parent) | ||||
| d | rwxr-xr-x | 4,096 | .pc | |
| d | rwxr-xr-x | 4,096 | config | |
| d | rwxr-xr-x | 4,096 | current | |
| d | rwxr-xr-x | 4,096 | debian | |
| d | rwxr-xr-x | 4,096 | docs | |
| d | rwxr-xr-x | 4,096 | jni | |
| d | rwxr-xr-x | 4,096 | pipelines | |
| d | rwxr-xr-x | 4,096 | pytools | |
| d | rwxr-xr-x | 4,096 | resources | |
| - | rwxr-xr-x | 109 | .gitignore | |
| - | rwxr-xr-x | 194 | README.md | |
| - | rwxr-xr-x | 3,265 | Xcalcmem.sh | |
| - | rwxr-xr-x | 1,953 | a_sample_mt.sh | |
| - | rwxr-xr-x | 2,674 | addadapters.sh | |
| - | rwxr-xr-x | 2,291 | addssu.sh | |
| - | rwxr-xr-x | 2,114 | adjusthomopolymers.sh | |
| - | rwxr-xr-x | 2,052 | alltoall.sh | |
| - | rwxr-xr-x | 1,477 | analyzeaccession.sh | |
| - | rwxr-xr-x | 1,407 | analyzegenes.sh | |
| - | rwxr-xr-x | 2,246 | analyzesketchresults.sh | |
| - | rwxr-xr-x | 2,617 | applyvariants.sh | |
| - | rwxr-xr-x | 6,542 | bbcms.sh | |
| - | rwxr-xr-x | 2,828 | bbcountunique.sh | |
| - | rwxr-xr-x | 8,839 | bbcrisprfinder.sh | |
| - | rwxr-xr-x | 21,849 | bbduk.sh | |
| - | rwxr-xr-x | 1,439 | bbest.sh | |
| - | rwxr-xr-x | 2,976 | bbfakereads.sh | |
| - | rwxr-xr-x | 20,023 | bbmap.sh | |
| - | rwxr-xr-x | 1,137 | bbmapskimmer.sh | |
| - | rwxr-xr-x | 4,543 | bbmask.sh | |
| - | rwxr-xr-x | 1,273 | bbmerge-auto.sh | |
| - | rwxr-xr-x | 13,853 | bbmerge.sh | |
| - | rwxr-xr-x | 10,064 | bbnorm.sh | |
| - | rwxr-xr-x | 3,381 | bbrealign.sh | |
| - | rwxr-xr-x | 396 | bbrename.sh | |
| - | rwxr-xr-x | 456 | bbsketch.sh | |
| - | rwxr-xr-x | 3,472 | bbsort.sh | |
| - | rwxr-xr-x | 6,008 | bbsplit.sh | |
| - | rwxr-xr-x | 3,344 | bbsplitpairs.sh | |
| - | rwxr-xr-x | 392 | bbstats.sh | |
| - | rwxr-xr-x | 517 | bbversion.sh | |
| - | rwxr-xr-x | 2,057 | bbwrap.sh | |
| - | rwxr-xr-x | 594 | bitbucket-pipelines.yml | |
| - | rwxr-xr-x | 3,967 | bloomfilter.sh | |
| - | rwxr-xr-x | 1,308 | bloomfilterparser.sh | |
| - | rwxr-xr-x | 2,030 | build.xml | |
| - | rwxr-xr-x | 6,259 | calcmem.sh | |
| - | rwxr-xr-x | 5,906 | calctruequality.sh | |
| - | rwxr-xr-x | 2,358 | callgenes.sh | |
| - | rwxr-xr-x | 2,378 | callpeaks.sh | |
| - | rwxr-xr-x | 9,451 | callvariants.sh | |
| - | rwxr-xr-x | 1,444 | callvariants2.sh | |
| - | rwxr-xr-x | 1,686 | cat.sh | |
| - | rwxr-xr-x | 1,874 | cg2illumina.sh | |
| - | rwxr-xr-x | 8,686 | checkstrand.sh | |
| - | rwxr-xr-x | 12,440 | clumpify.sh | |
| - | rwxr-xr-x | 1,841 | commonkmers.sh | |
| - | rwxr-xr-x | 1,123 | comparegff.sh | |
| - | rwxr-xr-x | 3,418 | comparelabels.sh | |
| - | rwxr-xr-x | 14,905 | comparesketch.sh | |
| - | rwxr-xr-x | 2,511 | comparessu.sh | |
| - | rwxr-xr-x | 2,298 | comparevcf.sh | |
| - | rwxr-xr-x | 1,972 | consect.sh | |
| - | rwxr-xr-x | 3,365 | consensus.sh | |
| - | rwxr-xr-x | 953 | copyfile.sh | |
| - | rwxr-xr-x | 2,315 | countbarcodes.sh | |
| - | rwxr-xr-x | 2,478 | countbarcodes2.sh | |
| - | rwxr-xr-x | 3,192 | countduplicates.sh | |
| - | rwxr-xr-x | 1,199 | countgc.sh | |
| - | rwxr-xr-x | 2,141 | countsharedlines.sh | |
| - | rwxr-xr-x | 147 | crossblock.sh | |
| - | rwxr-xr-x | 2,934 | crosscontaminate.sh | |
| - | rwxr-xr-x | 3,012 | cutgff.sh | |
| - | rwxr-xr-x | 2,069 | cutprimers.sh | |
| - | rwxr-xr-x | 5,014 | decontaminate.sh | |
| - | rwxr-xr-x | 9,159 | dedupe.sh | |
| - | rwxr-xr-x | 1,353 | dedupe2.sh | |
| - | rwxr-xr-x | 2,479 | dedupebymapping.sh | |
| - | rwxr-xr-x | 8,315 | demuxbyname.sh | |
| - | rwxr-xr-x | 1,538 | demuxserver.sh | |
| - | rwxr-xr-x | 1,839 | diskbench.sh | |
| - | rwxr-xr-x | 1,343 | estherfilter.sh | |
| - | rwxr-xr-x | 1,629 | explodetree.sh | |
| - | rwxr-xr-x | 1,963 | fetchproks.sh | |
| - | rwxr-xr-x | 3,131 | filterassemblysummary.sh | |
| - | rwxr-xr-x | 2,727 | filterbarcodes.sh | |
| - | rwxr-xr-x | 2,621 | filterbycoverage.sh | |
| - | rwxr-xr-x | 3,738 | filterbyname.sh | |
| - | rwxr-xr-x | 2,749 | filterbysequence.sh | |
| - | rwxr-xr-x | 3,995 | filterbytaxa.sh | |
| - | rwxr-xr-x | 8,333 | filterbytile.sh | |
| - | rwxr-xr-x | 2,586 | filterlines.sh | |
| - | rwxr-xr-x | 1,926 | filterqc.sh | |
| - | rwxr-xr-x | 2,626 | filtersam.sh | |
| - | rwxr-xr-x | 1,498 | filtersilva.sh | |
| - | rwxr-xr-x | 1,675 | filtersubs.sh | |
| - | rwxr-xr-x | 3,656 | filtervcf.sh | |
| - | rwxr-xr-x | 4,809 | findrepeats.sh | |
| - | rwxr-xr-x | 2,353 | fixgaps.sh | |
| - | rwxr-xr-x | 2,781 | fungalrelease.sh | |
| - | rwxr-xr-x | 2,468 | fuse.sh | |
| - | rwxr-xr-x | 846 | gbff2gff.sh | |
| - | rwxr-xr-x | 1,259 | getreads.sh | |
| - | rwxr-xr-x | 1,797 | gi2ancestors.sh | |
| - | rwxr-xr-x | 3,067 | gi2taxid.sh | |
| - | rwxr-xr-x | 1,934 | gitable.sh | |
| - | rwxr-xr-x | 2,706 | gradebins.sh | |
| - | rwxr-xr-x | 971 | grademerge.sh | |
| - | rwxr-xr-x | 1,594 | gradesam.sh | |
| - | rwxr-xr-x | 6,105 | icecreamfinder.sh | |
| - | rwxr-xr-x | 1,055 | icecreamgrader.sh | |
| - | rwxr-xr-x | 3,643 | icecreammaker.sh | |
| - | rwxr-xr-x | 2,335 | idmatrix.sh | |
| - | rwxr-xr-x | 1,750 | idtree.sh | |
| - | rwxr-xr-x | 1,658 | invertkey.sh | |
| - | rwxr-xr-x | 1,668 | kapastats.sh | |
| - | rwxr-xr-x | 3,488 | kcompress.sh | |
| - | rwxr-xr-x | 2,074 | keepbestcopy.sh | |
| - | rwxr-xr-x | 1,161 | khist.sh | |
| - | rwxr-xr-x | 6,082 | kmercountexact.sh | |
| - | rwxr-xr-x | 2,660 | kmercountmulti.sh | |
| - | rwxr-xr-x | 4,144 | kmercoverage.sh | |
| - | rwxr-xr-x | 2,625 | kmerfilterset.sh | |
| - | rwxr-xr-x | 2,607 | kmerlimit.sh | |
| - | rwxr-xr-x | 2,618 | kmerlimit2.sh | |
| - | rwxr-xr-x | 1,822 | kmerposition.sh | |
| - | rwxr-xr-x | 4,099 | kmutate.sh | |
| - | rwxr-xr-x | 2,417 | license.txt | |
| - | rwxr-xr-x | 2,689 | lilypad.sh | |
| - | rwxr-xr-x | 1,538 | loadreads.sh | |
| - | rwxr-xr-x | 2,310 | loglog.sh | |
| - | rwxr-xr-x | 1,877 | makechimeras.sh | |
| - | rwxr-xr-x | 2,279 | makecontaminatedgenomes.sh | |
| - | rwxr-xr-x | 2,101 | makepolymers.sh | |
| - | rwxr-xr-x | 2,156 | makequickbinvector.sh | |
| - | rwxr-xr-x | 1,732 | mapPacBio.sh | |
| - | rwxr-xr-x | 1,561 | matrixtocolumns.sh | |
| - | rwxr-xr-x | 1,018 | mergeOTUs.sh | |
| - | rwxr-xr-x | 2,609 | mergebarcodes.sh | |
| - | rwxr-xr-x | 1,365 | mergepgm.sh | |
| - | rwxr-xr-x | 3,348 | mergeribo.sh | |
| - | rwxr-xr-x | 993 | mergesam.sh | |
| - | rwxr-xr-x | 3,010 | mergesketch.sh | |
| - | rwxr-xr-x | 2,832 | mergesorted.sh | |
| - | rwxr-xr-x | 2,384 | microalign.sh | |
| - | rwxr-xr-x | 2,554 | msa.sh | |
| - | rwxr-xr-x | 3,336 | mutate.sh | |
| - | rwxr-xr-x | 2,146 | muxbyname.sh | |
| - | rwxr-xr-x | 3,899 | netfilter.sh | |
| - | rwxr-xr-x | 11,087 | novademux.sh | |
| - | rwxr-xr-x | 2,300 | partition.sh | |
| - | rwxr-xr-x | 1,738 | phylip2fasta.sh | |
| - | rwxr-xr-x | 2,285 | picksubset.sh | |
| - | rwxr-xr-x | 7,553 | pileup.sh | |
| - | rwxr-xr-x | 2,177 | pileup2.sh | |
| - | rwxr-xr-x | 2,810 | plotflowcell.sh | |
| - | rwxr-xr-x | 1,893 | plotgc.sh | |
| - | rwxr-xr-x | 1,672 | plothist.sh | |
| - | rwxr-xr-x | 997 | plotreadposition.sh | |
| - | rwxr-xr-x | 5,444 | polyfilter.sh | |
| - | rwxr-xr-x | 2,812 | postfilter.sh | |
| - | rwxr-xr-x | 933 | printtime.sh | |
| - | rwxr-xr-x | 1,418 | processfrag.sh | |
| - | rwxr-xr-x | 1,998 | processhi-c.sh | |
| - | rwxr-xr-x | 926 | processspeed.sh | |
| - | rwxr-xr-x | 6,254 | quickbin.sh | |
| - | rwxr-xr-x | 1,556 | randomgenome.sh | |
| - | rwxr-xr-x | 7,504 | randomreads.sh | |
| - | rwxr-xr-x | 2,519 | randomreadsmg.sh | |
| - | rwxr-xr-x | 1,503 | readlength.sh | |
| - | rwxr-xr-x | 1,521 | readqc.sh | |
| - | rwxr-xr-x | 974 | reducecolumns.sh | |
| - | rwxr-xr-x | 1,957 | reducesilva.sh | |
| - | rwxr-xr-x | 15,260 | reformat.sh | |
| - | rwxr-xr-x | 5,160 | reformatpb.sh | |
| - | rwxr-xr-x | 1,801 | removebadbarcodes.sh | |
| - | rwxr-xr-x | 2,563 | removecatdogmousehuman.sh | |
| - | rwxr-xr-x | 2,552 | removehuman.sh | |
| - | rwxr-xr-x | 2,563 | removehuman2.sh | |
| - | rwxr-xr-x | 2,947 | removemicrobes.sh | |
| - | rwxr-xr-x | 1,321 | removesmartbell.sh | |
| - | rwxr-xr-x | 4,326 | rename.sh | |
| - | rwxr-xr-x | 2,370 | renamebymapping.sh | |
| - | rwxr-xr-x | 1,570 | renamebysketch.sh | |
| - | rwxr-xr-x | 1,710 | renameimg.sh | |
| - | rwxr-xr-x | 2,978 | repair.sh | |
| - | rwxr-xr-x | 2,558 | replaceheaders.sh | |
| - | rwxr-xr-x | 3,322 | representative.sh | |
| - | rwxr-xr-x | 393 | rqcfilter.sh | |
| - | rwxr-xr-x | 14,316 | rqcfilter2.sh | |
| - | rwxr-xr-x | 1,061 | runhmm.sh | |
| - | rwxr-xr-x | 1,937 | samtoroc.sh | |
| - | rwxr-xr-x | 2,445 | scoresequence.sh | |
| - | rwxr-xr-x | 12,309 | seal.sh | |
| - | rwxr-xr-x | 12,438 | sendsketch.sh | |
| - | rwxr-xr-x | 2,643 | seqtovec.sh | |
| - | rwxr-xr-x | 2,102 | shred.sh | |
| - | rwxr-xr-x | 1,766 | shrinkaccession.sh | |
| - | rwxr-xr-x | 2,366 | shuffle.sh | |
| - | rwxr-xr-x | 2,380 | shuffle2.sh | |
| - | rwxr-xr-x | 6,682 | sketch.sh | |
| - | rwxr-xr-x | 3,547 | sketchblacklist.sh | |
| - | rwxr-xr-x | 3,266 | sketchblacklist2.sh | |
| - | rwxr-xr-x | 3,495 | sortbyname.sh | |
| - | rwxr-xr-x | 2,728 | splitbytaxa.sh | |
| - | rwxr-xr-x | 3,826 | splitnextera.sh | |
| - | rwxr-xr-x | 2,437 | splitribo.sh | |
| - | rwxr-xr-x | 1,071 | splitsam.sh | |
| - | rwxr-xr-x | 978 | splitsam4way.sh | |
| - | rwxr-xr-x | 990 | splitsam6way.sh | |
| - | rwxr-xr-x | 3,918 | stats.sh | |
| - | rwxr-xr-x | 1,215 | stats3.sh | |
| - | rwxr-xr-x | 2,396 | statswrapper.sh | |
| - | rwxr-xr-x | 1,758 | streamsam.sh | |
| - | rwxr-xr-x | 2,234 | subsketch.sh | |
| - | rwxr-xr-x | 2,054 | summarizecontam.sh | |
| - | rwxr-xr-x | 1,463 | summarizecoverage.sh | |
| - | rwxr-xr-x | 1,786 | summarizecrossblock.sh | |
| - | rwxr-xr-x | 1,025 | summarizemerge.sh | |
| - | rwxr-xr-x | 1,218 | summarizequast.sh | |
| - | rwxr-xr-x | 1,620 | summarizescafstats.sh | |
| - | rwxr-xr-x | 2,135 | summarizeseal.sh | |
| - | rwxr-xr-x | 1,377 | summarizesketch.sh | |
| - | rwxr-xr-x | 2,485 | synthmda.sh | |
| - | rwxr-xr-x | 1,841 | tadpipe.sh | |
| - | rwxr-xr-x | 12,479 | tadpole.sh | |
| - | rwxr-xr-x | 1,659 | tadwrapper.sh | |
| - | rwxr-xr-x | 1,962 | tagandmerge.sh | |
| - | rwxr-xr-x | 3,136 | taxonomy.sh | |
| - | rwxr-xr-x | 4,001 | taxserver.sh | |
| - | rwxr-xr-x | 1,573 | taxsize.sh | |
| - | rwxr-xr-x | 1,626 | taxtree.sh | |
| - | rwxr-xr-x | 1,036 | testfilesystem.sh | |
| - | rwxr-xr-x | 1,149 | testformat.sh | |
| - | rwxr-xr-x | 5,004 | testformat2.sh | |
| - | rwxr-xr-x | 2,084 | tetramerfreq.sh | |
| - | rwxr-xr-x | 990 | textfile.sh | |
| - | rwxr-xr-x | 1,932 | tiledump.sh | |
| - | rwxr-xr-x | 7,946 | train.sh | |
| - | rwxr-xr-x | 2,786 | translate6frames.sh | |
| - | rwxr-xr-x | 2,480 | trimcontigs.sh | |
| - | rwxr-xr-x | 1,117 | unicode2ascii.sh | |
| - | rwxr-xr-x | 1,304 | unzip.sh | |
| - | rwxr-xr-x | 891 | vcf2gff.sh | |
| - | rwxr-xr-x | 1,824 | webcheck.sh |
