File: CMD

package info (click to toggle)
bcalm 2.2.3-6
  • links: PTS, VCS
  • area: main
  • in suites: forky, sid
  • size: 624 kB
  • sloc: cpp: 3,132; python: 314; sh: 87; makefile: 13
file content (9 lines) | stat: -rwxr-xr-x 190 bytes parent folder | download | duplicates (4)
1
2
3
4
5
6
7
8
9
#!/bin/bash
if [ "$1" == "3" ]
then
    bcalm -in test3.fa -kmer-size 7 -abundance-min 1 -minimizer-size 5
    exit 0
fi

bcalm -in test1.fa -kmer-size 7 -abundance-min 1 -minimizer-size 5