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#dbNSFP v3.5a
[[annotation]]
file = "variation/dbNSFP.txt.gz"
names = ["cds_strand","refcodon","codonpos","codon_degeneracy","Ancestral_allele","AltaiNeandertal","Denisova","Ensembl_geneid","Ensembl_transcriptid","Ensembl_proteinid","LRT_score","LRT_converted_rankscore","LRT_pred","LRT_Omega","MutationTaster_score","MutationTaster_converted_rankscore","MutationTaster_pred","MutationTaster_model","MutationTaster_AAE","MutationAssessor_UniprotID","MutationAssessor_variant","MutationAssessor_score","MutationAssessor_score_rankscore","MutationAssessor_pred","FATHMM_score","FATHMM_converted_rankscore","FATHMM_pred","PROVEAN_score","PROVEAN_converted_rankscore","PROVEAN_pred","Transcript_id_VEST3","Transcript_var_VEST3","VEST3_score","VEST3_rankscore","MetaSVM_score","MetaSVM_rankscore","MetaSVM_pred","MetaLR_score","MetaLR_rankscore","MetaLR_pred","Reliability_index","M-CAP_score","M-CAP_rankscore","M-CAP_pred","REVEL_score","REVEL_rankscore","MutPred_score","MutPred_rankscore","MutPred_protID","MutPred_AAchange","MutPred_Top5features","CADD_raw","CADD_raw_rankscore","CADD_phred","DANN_score","DANN_rankscore","fathmm-MKL_coding_score","fathmm-MKL_coding_rankscore","fathmm-MKL_coding_pred","fathmm-MKL_coding_group","Eigen_coding_or_noncoding","Eigen-raw","Eigen-phred","Eigen-PC-raw","Eigen-PC-phred","Eigen-PC-raw_rankscore","GenoCanyon_score","GenoCanyon_score_rankscore","integrated_fitCons_score","integrated_fitCons_score_rankscore","integrated_confidence_value","GM12878_fitCons_score","GM12878_fitCons_score_rankscore","GM12878_confidence_value","H1-hESC_fitCons_score","H1-hESC_fitCons_score_rankscore","H1-hESC_confidence_value","HUVEC_fitCons_score","HUVEC_fitCons_score_rankscore","HUVEC_confidence_value","GERP++_NR","GERP++_RS","GERP++_RS_rankscore","phyloP100way_vertebrate","phyloP100way_vertebrate_rankscore","phyloP20way_mammalian","phyloP20way_mammalian_rankscore","phastCons100way_vertebrate","phastCons100way_vertebrate_rankscore","phastCons20way_mammalian","phastCons20way_mammalian_rankscore","SiPhy_29way_pi","SiPhy_29way_logOdds","SiPhy_29way_logOdds_rankscore","gnomAD_exomes_AC","gnomAD_exomes_AN","gnomAD_exomes_AF","gnomAD_genomes_AC","gnomAD_genomes_AN","gnomAD_genomes_AF","Interpro_domain","GTEx_V6p_gene","GTEx_V6p_tissue"]
columns = [13,14,15,16,17,18,19,20,21,22,36,37,38,39,40,41,42,43,44,45,46,47,48,49,50,51,52,53,54,55,56,57,58,59,60,61,62,63,64,65,66,67,68,69,70,71,72,73,74,75,76,77,78,79,80,81,82,83,84,85,86,87,88,89,90,91,92,93,94,95,96,97,98,99,100,101,102,103,104,105,106,107,108,109,110,111,112,113,114,115,116,117,118,119,188,189,190,215,216,217,243,244,245]
ops = ["first","first","first","first","first","first","first","first","first","first","first","first","first","first","first","first","first","first","first","first","first","first","first","first","first","first","first","first","first","first","first","first","first","first","first","first","first","first","first","first","first","first","first","first","first","first","first","first","first","first","first","first","first","first","first","first","first","first","first","first","first","first","first","first","first","first","first","first","first","first","first","first","first","first","first","first","first","first","first","first","first","first","first","first","first","first","first","first","first","first","first","first","first","first","first","first","first","first","first","first","first","first","first"]
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