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bcbio 1.2.9-4
  • links: PTS, VCS
  • area: contrib
  • in suites: sid
  • size: 36,792 kB
  • sloc: python: 45,766; sh: 209; makefile: 159; xml: 129

Folder: examples

d .. (parent)
d d rwxr-xr-x 78 archived
- - rwxr-xr-x 1,002 HCC2218-sv-getdata.sh
- - rw-r--r-- 1,292 HCC2218-sv.yaml
- - rw-r--r-- 2,586 NA12878-ensemble.yaml
- - rwxr-xr-x 791 NA12878-exome-methodcmp-getdata.sh
- - rw-r--r-- 781 NA12878-exome-methodcmp.yaml
- - rwxr-xr-x 573 NA12878-hg38-validate-getdata.sh
- - rw-r--r-- 5,854 NA12878-hg38-validate.yaml
- - rw-r--r-- 816 NA12878-illumina.yaml
- - rwxr-xr-x 1,090 NA12878-sv-getdata.sh
- - rw-r--r-- 970 NA12878-sv.yaml
- - rw-r--r-- 7,390 NA12878-trio-wgs-joint.yaml
- - rwxr-xr-x 665 NA12878-trio-wgs-validate-getdata.sh
- - rw-r--r-- 1,559 NA12878-trio-wgs-validate.yaml
- - rwxr-xr-x 1,178 NA12878.validate.sh
- - rwxr-xr-x 1,424 NA24385-10x-getdata.sh
- - rw-r--r-- 1,128 NA24385-10x.yaml
- - rwxr-xr-x 1,767 cancer-dream-syn3-getdata.sh
- - rw-r--r-- 1,287 cancer-dream-syn3.yaml
- - rw-r--r-- 3,273 cancer-dream-syn4.yaml
- - rwxr-xr-x 1,020 cancer-giab-na12878-na24385-getdata.sh
- - rw-r--r-- 1,288 cancer-giab-na12878-na24385.yaml
- - rw-r--r-- 655 chip_seq.yaml
- - rwxr-xr-x 825 giab-validate-setup.sh
- - rw-r--r-- 1,340 giab-validate.yaml
- - rw-r--r-- 1,142 mitochondrial_variants_amplicons.yaml
- - rwxr-xr-x 1,043 rnaseq-seqc-getdata.sh
- - rw-r--r-- 289 rnaseq-seqc.yaml
- - rw-r--r-- 418 rnaseq.variant_calling.yaml
- - rw-r--r-- 182 seqc.csv
- - rw-r--r-- 1,891 somatic_tumor_normal_gatkcnv.yaml