1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
|
[metadata]
author = bcbio community
author_email = biovalidation@googlegroups.com
classifiers =
Environment :: Console
Intended Audience :: Education
Intended Audience :: Healthcare Industry
Intended Audience :: Science/Research
License :: OSI Approved :: MIT License
Natural Language :: English
Operating System :: POSIX :: Linux
Programming Language :: Python
Programming Language :: Python :: 3
Programming Language :: Python :: 3.6
Programming Language :: Python :: 3.7
Programming Language :: Python :: 3.8
Topic :: Scientific/Engineering :: Bio-Informatics
description = Best-practice pipelines for fully automated high throughput sequencing analysis
keywords = ChIP-seq, DNA, genomics, pipeline, RNA, RNA-seq, sequencing, SNP, variant calling
license = MIT
license_file = LICENSE.txt
long_description = file: README.md
long_description_content_type = text/markdown
name = bcbio-nextgen
project_urls =
Documentation = https://bcbio-nextgen.readthedocs.io/
Source = https://github.com/bcbio/bcbio-nextgen
Tracker = https://github.com/bcbio/bcbio-nextgen/issues
url = https://github.com/bcbio/bcbio-nextgen
[options]
include_package_data = True
packages = find:
python_requires = >=3.6
scripts =
scripts/bcbio_nextgen.py
scripts/bcbio_setup_genome.py
scripts/bcbio_prepare_samples.py
scripts/bcbio_fastq_umi_prep.py
scripts/cwltool2wdl.py
zip_safe = False
[options.packages.find]
include = bcbio, bcbio.*
[flake8]
max-line-length = 99
|
