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Source: bcftools
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders: Michael R. Crusoe <crusoe@debian.org>
Section: science
Priority: optional
Build-Depends: debhelper-compat (= 13),
zlib1g-dev,
libbz2-dev,
liblzma-dev,
libhts-dev (>= 1.11),
libgsl-dev,
tabix <!nocheck>,
libio-pty-perl <!nocheck>
Standards-Version: 4.5.0
Vcs-Browser: https://salsa.debian.org/med-team/bcftools
Vcs-Git: https://salsa.debian.org/med-team/bcftools.git
Homepage: http://samtools.github.io/bcftools/
Rules-Requires-Root: no
Package: bcftools
Architecture: any
Depends: ${shlibs:Depends},
${misc:Depends},
sse2-support [i386]
Recommends: perl
Suggests:
# These are needed for plot-vcfstats
python3,
python3-numpy,
python3-matplotlib,
texlive-latex-recommended
Breaks: samtools (<< 1.0)
Replaces: samtools (<< 1.0)
Description: genomic variant calling and manipulation of VCF/BCF files
BCFtools is a set of utilities that manipulate variant calls in the
Variant Call Format (VCF) and its binary counterpart BCF. All commands work
transparently with both VCFs and BCFs, both uncompressed and BGZF-compressed.
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