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#!/usr/bin/make -f
#export DH_VERBOSE = 1
include /usr/share/dpkg/default.mk
ifneq (,$(filter $(DEB_TARGET_ARCH_CPU),i386))
export DEB_CFLAGS_MAINT_APPEND += -mfpmath=sse -msse2
endif
export DEB_BUILD_MAINT_OPTIONS = hardening=+all
%:
dh $@
override_dh_installman:
dh_installman --language=C
# clean target tries to include config.mk which does not exist inside clean source tree
clean: config.mk
override_dh_auto_clean:
dh_auto_clean
rm -f test/mpileup/indel-AD.1.out.new test/view-t.1.out.new test/view-t.2.out.new
config.mk:
$(RM) $@ && touch $@
# m4 calls `make print-version` in configure.ac to set the version string.
# If `make` is not silent, this string includes logging messages about changing
# directories due to the way it is invoked, which breaks
# the C compiler test because it introduces a multiline #define statement with
# newlines not escaped.
override_dh_autoreconf: config.mk
export MAKEFLAGS="-s"; dh_autoreconf
#override_dh_auto_configure:
override_dh_auto_configure:
dh_auto_configure -- \
--with-htslib=system \
--enable-gsl \
--with-cblas=gslcblas \
--with-bcf-plugin-dir=/usr/lib/$(DEB_HOST_MULTIARCH)/bcftools
override_dh_install:
dh_install
# Fix Perl interpreter PATH
for pscript in `grep -Rl '#!/usr/bin/env \+perl' debian/*` ; do \
sed -i '1s?#!/usr/bin/env \+perl?#!/usr/bin/perl?' $${pscript} ; \
done
override_dh_auto_test:
ifeq (,$(filter nocheck,$(DEB_BUILD_OPTIONS)))
make test-no-plugins VERBOSE=1
endif
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