File: annotate34.vcf

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##fileformat=VCFv4.2
##FILTER=<ID=PASS,Description="All filters passed">
##contig=<ID=chr21,length=45090682>
##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
##FORMAT=<ID=AD,Number=R,Type=Integer,Description="Allelic depths for the ref and alt alleles in the order listed">
##FILTER=<ID=HET1,Description="Heterozygous in the first haplotype">
##FILTER=<ID=HET2,Description="Heterozygous in the second haplotype">
##INFO=<ID=SVTYPE,Number=1,Type=String,Description="SVTYPE">
##INFO=<ID=SVLEN,Number=1,Type=Integer,Description="SVLEN">
#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	syndip
chr21	8914240	.	gttccattccattccattcaattccattccattgcattccattccattccattcca	G	30	HET2	SVTYPE=DEL;SVLEN=55	GT:AD	0|.:3,1
chr21	8914680	.	tattccattccattcc	TATTCCATTCCATTCCATTCCATTCCATTCCATTCCATTCCATTCTAGTTGATTCCATTCCATTCCATCCCGTTCCATTCCATTCCGTTACTTTCTATTCCATTCCATTCCATTCC	30	HET2	SVTYPE=INS;SVLEN=100	GT:AD	0|.:1,1
chr21	8914690	.	c	CATTCCATTCCATTCCATTCCATTCTAGTTGATTCCATTCCATTCCATCCCGTTCCATTCCATTCCGTTACTTTCT	30	HET2	SVTYPE=INS;SVLEN=75	GT:AD	0|.:2,1