1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17
|
##fileformat=VCFv4.1
##FILTER=<ID=PASS,Description="All filters passed">
##contig=<ID=1>
##contig=<ID=2>
##contig=<ID=11>
##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
##INFO=<ID=OLD_REC,Number=1,Type=String,Description="Original variant. Format: CHR|POS|REF|ALT|USED_ALT_IDX">
#CHROM POS ID REF ALT QUAL FILTER INFO FORMAT sample
1 105174100 . G C . . OLD_REC=1|105174100|GCCCGC|CGCCCCGC|1 GT 0/1
1 105174100 . G GGC . . OLD_REC=1|105174100|GCCCGC|CGCCCCGC|1 GT 0/1
2 36744887 . C G . . OLD_REC=2|36744886|GCCCC|GGCT|1 GT 0/1
2 36744889 . C T . . OLD_REC=2|36744886|GCCCC|GGCT|1 GT 0/1
2 36744889 . CC C . . OLD_REC=2|36744886|GCCCC|GGCT|1 GT 0/1
11 101 . G C . . OLD_REC=11|101|GCGT|G,GCGA,GTGA,CCGT|4 GT 0/.
11 101 . GCGT G . . OLD_REC=11|101|GCGT|G,GCGA,GTGA,CCGT|1 GT 0/1
11 102 . C T . . OLD_REC=11|101|GCGT|G,GCGA,GTGA,CCGT|3 GT 0/.
11 104 . T A . . OLD_REC=11|101|GCGT|G,GCGA,GTGA,CCGT|2,3 GT 0/.
|