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##fileformat=VCFv4.2
##FILTER=<ID=PASS,Description="All filters passed">
##reference=file:///lustre/scratch116/vr/ref/human/GRCh37/hs37d5.fa
##contig=<ID=2,length=243199373>
##FORMAT=<ID=PL,Number=G,Type=Integer,Description="List of Phred-scaled genotype likelihoods">
##FORMAT=<ID=AD,Number=R,Type=Integer,Description="Allelic depths (high-quality bases)">
##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
##INFO=<ID=AC,Number=A,Type=Integer,Description="Allele count in genotypes for each ALT allele, in the same order as listed">
##INFO=<ID=AN,Number=1,Type=Integer,Description="Total number of alleles in called genotypes">
##INFO=<ID=DP4,Number=4,Type=Integer,Description="Number of high-quality ref-forward , ref-reverse, alt-forward and alt-reverse bases">
##INFO=<ID=MQ,Number=1,Type=Integer,Description="Average mapping quality">
#CHROM POS ID REF ALT QUAL FILTER INFO FORMAT NA07051_CEU NA12843_CEU NA18488_YRI NA18489_YRI NA18498_YRI NA18504_YRI NA18510_YRI NA18519_YRI NA18858_YRI NA18861_YRI NA18868_YRI NA18871_YRI NA18874_YRI NA18881_YRI NA18907_YRI NA18909_YRI NA18917_YRI NA18933_YRI NA18934_YRI NA19108_YRI NA19119_YRI NA19129_YRI NA19131_YRI NA19138_YRI NA19147_YRI NA19189_YRI NA19197_YRI NA19198_YRI NA19206_YRI NA19214_YRI NA19223_YRI NA19238_YRI NA19239_YRI NA19248_YRI NA19256_YRI
2 136608646 . G A 4.92443 . AC=2;AN=70;DP4=95,24,45,11;MQ=59 GT:PL:AD 0/1:32,3,0:0,1 0/1:0,3,37:1,0 0/0:0,6,77:2,0 0/0:0,3,33:1,0 0/0:0,6,67:2,0 0/0:0,6,67:2,0 0/0:0,6,67:2,0 0/0:0,3,60:1,0 0/0:0,21,147:7,0 0/0:0,24,161:8,0 0/0:0,6,52:2,0 0/0:0,3,38:1,0 0/0:0,6,72:2,0 0/0:0,18,197:6,0 0/0:0,21,175:7,0 0/0:0,12,129:4,0 0/0:0,21,220:7,0 0/0:0,9,111:3,0 0/0:0,6,76:2,0 0/0:0,15,125:5,0 0/0:0,3,32:1,0 0/0:0,12,110:4,0 0/0:0,3,41:1,0 0/0:0,12,124:4,0 0/0:0,6,70:2,0 0/0:0,18,140:6,0 0/0:0,3,22:1,0 0/0:0,6,63:2,0 0/0:0,3,46:1,0 0/0:0,3,39:1,0 0/0:0,3,42:1,0 0/0:0,12,142:4,0 0/0:0,6,67:2,0 0/0:0,3,39:1,0 0/0:0,6,54:2,0
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