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# This file was produced by vcfcheck and can be plotted using plot-vcfcheck.
#
# Definition of sets:
# ID [2]id [3]tab-separated file names
# SN, Summary numbers:
# SN [2]id [3]key [4]value
SN 0 number of samples: 2
SN 0 number of SNPs: 1
SN 0 number of MNPs: 0
SN 0 number of indels: 10
SN 0 number of others: 0
SN 0 number of multiallelic sites: 4
SN 0 ts/tv: 0.00
# Sis, Singleton stats:
# SiS [2]id [3]allele count [4]number of SNPs [5]number of transitions [6]number of transversions [7]number of indels
SiS 0 1 2 0 2 0
# AF, Stats by non-reference allele frequency:
# AF [2]id [3]allele frequency [4]number of SNPs [5]number of transitions [6]number of transversions [7]number of indels
AF 0 0.000000 2 0 2 0
AF 0 49.494949 0 0 0 12
AF 0 100.000000 0 0 0 1
# IDD, InDel distribution:
# IDD [2]id [3]length (deletions negative) [4]count
IDD 0 -8 1
IDD 0 -4 1
IDD 0 -3 3
IDD 0 -2 2
IDD 0 -1 3
IDD 0 1 2
IDD 0 2 1
# ST, Substitution types:
# ST [2]id [3]type [4]count
ST 0 A>C 0
ST 0 A>G 0
ST 0 A>T 0
ST 0 C>A 0
ST 0 C>G 0
ST 0 C>T 0
ST 0 G>A 0
ST 0 G>C 1
ST 0 G>T 1
ST 0 T>A 0
ST 0 T>C 0
ST 0 T>G 0
# PSC, Per-sample counts
# PSC [2]id [3]sample [4]nRefHom [5]nNonRefHom [6]nHets [7]nTransitions [8]nTransversions [9]nIndels [10]average depth
PSC 0 A 0 0 1 0 1 10 27
PSC 0 B 0 0 1 0 1 10 27
# DP, Depth distribution
# DP [2]id [3]bin [4]number of genotypes [5]fraction of genotypes (%)
DP 0 10 2 9.090909
DP 0 21 2 9.090909
DP 0 22 2 9.090909
DP 0 26 4 18.181818
DP 0 30 2 9.090909
DP 0 31 2 9.090909
DP 0 32 4 18.181818
DP 0 35 4 18.181818
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